FFCP PHASE1:Hg19::chr1:59775698..59775710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55277 | |EntrezGene=55277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25610 | |HGNC=25610 | ||
|TSSclassifier=strong | |||
|UniProt=B1AK94 | |UniProt=B1AK94 | ||
|association_with_transcript=-39bp_to_NM_001244714_5end | |association_with_transcript=-39bp_to_NM_001244714_5end | ||
|cluster_id=chr1:59775698..59775710,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_16_at_FGGY_5end | |description=CAGE_peak_16_at_FGGY_5end | ||
|id=chr1:59775698..59775710,+ | |id=chr1:59775698..59775710,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.98e-11!12;CL:0000417!9.98e-11!12;CL:0000668!9.98e-11!12;CL:0000414!9.98e-11!12;CL:0000412!9.98e-11!12;CL:0000182!9.98e-11!12 | |ontology_enrichment_celltype=CL:0000181!9.98e-11!12;CL:0000417!9.98e-11!12;CL:0000668!9.98e-11!12;CL:0000414!9.98e-11!12;CL:0000412!9.98e-11!12;CL:0000182!9.98e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.25e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.44e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.78e-67;3 | |||
|ontology_enrichment_disease=DOID:5662!7.27e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!9.84e-13!6;UBERON:0006215!9.84e-13!6;UBERON:0005057!2.64e-10!26;UBERON:0002107!3.26e-10!19;UBERON:0006925!3.26e-10!19;UBERON:0008836!3.26e-10!19;UBERON:0008835!8.58e-09!22;UBERON:0003894!8.58e-09!22;UBERON:0002680!1.20e-08!9;UBERON:0001895!1.20e-08!9;UBERON:0010092!1.20e-08!9;UBERON:0009854!2.11e-08!23;UBERON:0005172!5.61e-08!55;UBERON:0005173!5.61e-08!55;UBERON:0007499!1.03e-07!25;UBERON:0009497!1.03e-07!25;UBERON:0000015!1.03e-07!25;UBERON:0002423!1.03e-07!25;UBERON:0006235!1.03e-07!25;UBERON:0004161!1.03e-07!25;UBERON:0009856!2.09e-07!26;UBERON:0002417!4.37e-07!61;UBERON:0000916!4.37e-07!61 | |ontology_enrichment_uberon=UBERON:0002037!9.84e-13!6;UBERON:0006215!9.84e-13!6;UBERON:0005057!2.64e-10!26;UBERON:0002107!3.26e-10!19;UBERON:0006925!3.26e-10!19;UBERON:0008836!3.26e-10!19;UBERON:0008835!8.58e-09!22;UBERON:0003894!8.58e-09!22;UBERON:0002680!1.20e-08!9;UBERON:0001895!1.20e-08!9;UBERON:0010092!1.20e-08!9;UBERON:0009854!2.11e-08!23;UBERON:0005172!5.61e-08!55;UBERON:0005173!5.61e-08!55;UBERON:0007499!1.03e-07!25;UBERON:0009497!1.03e-07!25;UBERON:0000015!1.03e-07!25;UBERON:0002423!1.03e-07!25;UBERON:0006235!1.03e-07!25;UBERON:0004161!1.03e-07!25;UBERON:0009856!2.09e-07!26;UBERON:0002417!4.37e-07!61;UBERON:0000916!4.37e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.10e-34;6!UBERON:0002680;7.21e-23;9!UBERON:0001895;7.21e-23;9!UBERON:0004733;2.40e-17;12!UBERON:0002028;2.40e-17;12!UBERON:0004732;4.54e-16;13!UBERON:0002107;3.93e-11;19!UBERON:0006925;3.93e-11;19!UBERON:0002423;1.30e-08;25!UBERON:0002365;2.84e-07;31!UBERON:0002330;2.84e-07;31!UBERON:0002368;6.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.72e-34,6;UBERON:0006215,6.72e-34,6;UBERON:0002680,6.95e-23,9;UBERON:0001895,6.95e-23,9;UBERON:0010092,6.95e-23,9;UBERON:0004733,2.33e-17,12;UBERON:0002028,2.33e-17,12;UBERON:0007277,2.33e-17,12;UBERON:0004732,4.42e-16,13;UBERON:0003076,4.94e-14,15;UBERON:0003057,4.94e-14,15;UBERON:0002107,4.07e-11,19;UBERON:0006925,4.07e-11,19;UBERON:0008836,4.07e-11,19;UBERON:0008835,1.09e-09,22;UBERON:0003894,1.09e-09,22;UBERON:0009854,2.70e-09,23;UBERON:0007499,1.34e-08,25;UBERON:0009497,1.34e-08,25;UBERON:0000015,1.34e-08,25;UBERON:0002423,1.34e-08,25;UBERON:0006235,1.34e-08,25;UBERON:0004161,1.34e-08,25;UBERON:0009856,2.72e-08,26;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31;UBERON:0005172,6.94e-07,54;UBERON:0005173,6.94e-07,54 | |||
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|short_description=p16@FGGY | |short_description=p16@FGGY | ||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p16@FGGY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FGGY_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -39bp_to_NM_001244714_5end |
EntrezGene: | FGGY |
HGNC: | 25610 |
UniProt: | B1AK94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.44e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.72e-34 | 6 |
rhombic lip | 6.72e-34 | 6 |
regional part of metencephalon | 6.95e-23 | 9 |
metencephalon | 6.95e-23 | 9 |
future metencephalon | 6.95e-23 | 9 |
segmental subdivision of hindbrain | 2.33e-17 | 12 |
hindbrain | 2.33e-17 | 12 |
presumptive hindbrain | 2.33e-17 | 12 |
segmental subdivision of nervous system | 4.42e-16 | 13 |
posterior neural tube | 4.94e-14 | 15 |
chordal neural plate | 4.94e-14 | 15 |
liver | 4.07e-11 | 19 |
digestive gland | 4.07e-11 | 19 |
liver bud | 4.07e-11 | 19 |
hepatic diverticulum | 1.09e-09 | 22 |
liver primordium | 1.09e-09 | 22 |
digestive tract diverticulum | 2.70e-09 | 23 |
epithelial sac | 1.34e-08 | 25 |
epithelium of foregut-midgut junction | 1.34e-08 | 25 |
anatomical boundary | 1.34e-08 | 25 |
hepatobiliary system | 1.34e-08 | 25 |
foregut-midgut junction | 1.34e-08 | 25 |
septum transversum | 1.34e-08 | 25 |
sac | 2.72e-08 | 26 |
exocrine gland | 4.77e-07 | 31 |
exocrine system | 4.77e-07 | 31 |
abdomen element | 6.94e-07 | 54 |
abdominal segment element | 6.94e-07 | 54 |