FFCP PHASE1:Hg19::chr19:45973120..45973132,+: Difference between revisions
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|id=chr19:45973120..45973132,+
|short_description=p30@FOSB
|description=CAGE_peak_30_at_FOSB_5end
|association_with_transcript=-1bp_to_uc002pca.3_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_uc002pca.3_5end | |||
|cluster_id=chr19:45973120..45973132,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_30_at_FOSB_5end | |||
|id=chr19:45973120..45973132,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.19e-09!5;CL:0000457!1.19e-09!5;CL:0002191!1.19e-09!5;CL:0000097!1.19e-09!5;CL:0000831!1.19e-09!5;CL:0002028!1.19e-09!5;CL:0000791!6.88e-09!18;CL:0000789!6.88e-09!18;CL:0002420!6.88e-09!18;CL:0002419!6.88e-09!18;CL:0000790!6.88e-09!18;CL:0000738!9.87e-09!140;CL:0000624!1.11e-07!6;CL:0000623!2.09e-07!3;CL:0000825!2.09e-07!3;CL:0002031!4.00e-07!124;CL:0000842!7.81e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.03e-60;5!CL:0000163;8.87e-34;9!CL:0000151;3.97e-09;36!CL:0000624;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.03e-60,5;CL:0002028,6.03e-60,5;CL:0000163,8.87e-34,9;CL:0000151,4.60e-09,36;CL:0000839,1.75e-08,66;CL:0000557,2.29e-08,67;CL:0000766,7.95e-08,72;CL:0002031,2.87e-07,120;CL:0000624,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.57e-09;4!DOID:1612;1.57e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.70e-09,4;DOID:1612,1.70e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.92e-07,76;UBERON:0001474,6.13e-07,82 | |||
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|short_description=p30@FOSB | |||
}} | }} |
Latest revision as of 17:40, 18 September 2015
Short description: | p30@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_FOSB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -1bp_to_uc002pca.3_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.03e-60 | 5 |
basophil mast progenitor cell | 6.03e-60 | 5 |
endocrine cell | 8.87e-34 | 9 |
secretory cell | 4.60e-09 | 36 |
myeloid lineage restricted progenitor cell | 1.75e-08 | 66 |
granulocyte monocyte progenitor cell | 2.29e-08 | 67 |
myeloid leukocyte | 7.95e-08 | 72 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
CD4-positive, alpha-beta T cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.92e-07 | 76 |
bone element | 6.13e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.70e-09 | 4 |
breast cancer | 1.70e-09 | 4 |