FFCP PHASE1:Hg19::chr2:85921250..85921284,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:85921250..85921284,+
|short_description=p7@GNLY
|description=CAGE_peak_7_at_GNLY_5end
|association_with_transcript=-129bp_to_ENST00000263863,NM_006433,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10578 | |EntrezGene=10578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4414 | |HGNC=4414 | ||
|TSSclassifier=strong | |||
|UniProt=P22749 | |UniProt=P22749 | ||
|association_with_transcript=-129bp_to_ENST00000263863,NM_006433,NM_012483,uc002sql.3,uc010fgp.2,uc010ysx.1_5end | |||
|cluster_id=chr2:85921250..85921284,+ | |||
|description=CAGE_peak_7_at_GNLY_5end | |||
|id=chr2:85921250..85921284,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.56e-49!42;CL:0000860!1.58e-45!45;CL:0000738!8.70e-34!140;CL:0002087!4.70e-33!119;CL:0000766!1.66e-32!76;CL:0002194!8.40e-30!63;CL:0000576!8.40e-30!63;CL:0000040!8.40e-30!63;CL:0000559!8.40e-30!63;CL:0002031!2.19e-29!124;CL:0002009!1.12e-28!65;CL:0000839!2.88e-28!70;CL:0000557!9.08e-28!71;CL:0000037!6.39e-27!172;CL:0000566!6.39e-27!172;CL:0002032!1.93e-25!165;CL:0000837!1.93e-25!165;CL:0000988!7.77e-25!182;CL:0000763!5.32e-21!112;CL:0000049!5.32e-21!112;CL:0000134!1.83e-11!358;CL:0000623!3.08e-11!3;CL:0000825!3.08e-11!3;CL:0002320!5.11e-11!365;CL:0000219!4.26e-10!390;CL:0000034!1.34e-07!444;CL:0000048!1.36e-07!430;CL:0000723!2.49e-07!436;CL:0000625!5.21e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;9.75e-40;3!CL:0000860;7.73e-18;33!CL:0002057;7.73e-18;33!CL:0000473;2.65e-14;39!CL:0000234;2.65e-14;39!CL:0000576;1.36e-08;48!CL:0000771;4.37e-08;2!CL:0000094;1.13e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.93e-40,3;CL:0000825,2.93e-40,3;CL:0000860,8.13e-15,42;CL:0002057,8.13e-15,42;CL:0000766,1.01e-13,72;CL:0000473,6.69e-13,48;CL:0000234,6.69e-13,48;CL:0000738,1.57e-12,136;CL:0002032,2.25e-10,161;CL:0000837,2.25e-10,161;CL:0002087,3.03e-10,115;CL:0002194,3.26e-10,59;CL:0000576,3.26e-10,59;CL:0000040,3.26e-10,59;CL:0000559,3.26e-10,59;CL:0000037,6.95e-10,168;CL:0002009,7.24e-10,61;CL:0002031,8.98e-10,120;CL:0000988,2.61e-09,177;CL:0000839,4.35e-09,66;CL:0000557,6.03e-09,67;CL:0000763,7.20e-09,108;CL:0000049,7.20e-09,108;CL:0000771,4.38e-08,2;CL:0000094,1.11e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.05e-29!102;UBERON:0003061!6.05e-29!102;UBERON:0002193!1.43e-25!112;UBERON:0002371!7.60e-24!80;UBERON:0001474!1.10e-21!86;UBERON:0002405!9.78e-20!115;UBERON:0004765!4.67e-19!101;UBERON:0001434!4.67e-19!101;UBERON:0003081!1.10e-10!216;UBERON:0002384!2.07e-10!375;UBERON:0002204!1.59e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.83e-08,76;UBERON:0001434,1.31e-07,100;UBERON:0001474,3.19e-07,82 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0,0,0.726991193897824,1.13362783106643,0,1.16214518452842,0.411167888021826,1.23882548358041,1.1507695692886,0.256160706529101,0,2.06847408441971,0,4.06279459783025,0.376484679085209,0.545812300115692,0.674170453335254,0.918251677112708,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.75374599577023,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.639933055772092,0,0,0,0.403213486449465,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,4.45080472701402,0,0,0,0,0,0,0,21.1835663058301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,1.37921532141349,1.2937654491571,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@GNLY | |||
}} | }} |
Latest revision as of 17:47, 18 September 2015
Short description: | p7@GNLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GNLY_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000263863, NM_006433, NM_012483, uc002sql.3, uc010fgp.2, uc010ysx.1_5end |
EntrezGene: | GNLY |
HGNC: | 4414 |
UniProt: | P22749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.93e-40 | 3 |
pro-NK cell | 2.93e-40 | 3 |
classical monocyte | 8.13e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.13e-15 | 42 |
myeloid leukocyte | 1.01e-13 | 72 |
defensive cell | 6.69e-13 | 48 |
phagocyte | 6.69e-13 | 48 |
leukocyte | 1.57e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-10 | 161 |
nongranular leukocyte | 3.03e-10 | 115 |
monopoietic cell | 3.26e-10 | 59 |
monocyte | 3.26e-10 | 59 |
monoblast | 3.26e-10 | 59 |
promonocyte | 3.26e-10 | 59 |
hematopoietic stem cell | 6.95e-10 | 168 |
macrophage dendritic cell progenitor | 7.24e-10 | 61 |
hematopoietic lineage restricted progenitor cell | 8.98e-10 | 120 |
hematopoietic cell | 2.61e-09 | 177 |
myeloid lineage restricted progenitor cell | 4.35e-09 | 66 |
granulocyte monocyte progenitor cell | 6.03e-09 | 67 |
myeloid cell | 7.20e-09 | 108 |
common myeloid progenitor | 7.20e-09 | 108 |
eosinophil | 4.38e-08 | 2 |
granulocyte | 1.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.83e-08 | 76 |
skeletal system | 1.31e-07 | 100 |
bone element | 3.19e-07 | 82 |