FFCP PHASE1:Hg19::chr15:68117844..68117858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390598 | |EntrezGene=390598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21326 | |HGNC=21326 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5H7 | |UniProt=G3V5H7 | ||
|association_with_transcript=0bp_to_ENST00000554054_5end | |association_with_transcript=0bp_to_ENST00000554054_5end | ||
|cluster_id=chr15:68117844..68117858,+ | |||
|coexpression_cluster_id=C150 | |coexpression_cluster_id=C150 | ||
|description=CAGE_peak_3_at_SKOR1_5end | |description=CAGE_peak_3_at_SKOR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!1.15e-15!2;CL:0000214!7.42e-11!3;CL:0000312!4.79e-07!5 | |ontology_enrichment_celltype=CL:0000242!1.15e-15!2;CL:0000214!7.42e-11!3;CL:0000312!4.79e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000214;5.96e-34;3!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0002159;1.86e-08;14!CL:0000327;5.93e-08;15 | |ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000214;5.96e-34;3!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0002159;1.86e-08;14!CL:0000327;5.93e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0000214,5.96e-34,3;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0002159,1.86e-08,14;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | |ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.08e-30!15;UBERON:0003057!2.08e-30!15;UBERON:0004733!9.70e-22!12;UBERON:0002028!9.70e-22!12;UBERON:0007277!9.70e-22!12;UBERON:0004732!3.91e-20!13;UBERON:0002298!5.41e-15!8;UBERON:0002680!1.58e-13!9;UBERON:0001895!1.58e-13!9;UBERON:0010092!1.58e-13!9;UBERON:0006915!7.42e-11!3;UBERON:0002018!7.42e-11!3;UBERON:0002217!7.42e-11!3;UBERON:0007616!7.42e-11!3;UBERON:0002240!8.17e-11!3;UBERON:0000988!1.09e-10!3;UBERON:0001896!1.20e-10!3;UBERON:0005290!1.20e-10!3;UBERON:0010096!1.20e-10!3;UBERON:0001049!2.88e-08!57;UBERON:0005068!2.88e-08!57;UBERON:0006241!2.88e-08!57;UBERON:0007135!2.88e-08!57;UBERON:0004905!5.08e-07!5;UBERON:0000982!5.08e-07!5;UBERON:0004770!5.08e-07!5;UBERON:0005174!5.38e-07!5;UBERON:0001137!5.38e-07!5 | |ontology_enrichment_uberon=UBERON:0003076!2.08e-30!15;UBERON:0003057!2.08e-30!15;UBERON:0004733!9.70e-22!12;UBERON:0002028!9.70e-22!12;UBERON:0007277!9.70e-22!12;UBERON:0004732!3.91e-20!13;UBERON:0002298!5.41e-15!8;UBERON:0002680!1.58e-13!9;UBERON:0001895!1.58e-13!9;UBERON:0010092!1.58e-13!9;UBERON:0006915!7.42e-11!3;UBERON:0002018!7.42e-11!3;UBERON:0002217!7.42e-11!3;UBERON:0007616!7.42e-11!3;UBERON:0002240!8.17e-11!3;UBERON:0000988!1.09e-10!3;UBERON:0001896!1.20e-10!3;UBERON:0005290!1.20e-10!3;UBERON:0010096!1.20e-10!3;UBERON:0001049!2.88e-08!57;UBERON:0005068!2.88e-08!57;UBERON:0006241!2.88e-08!57;UBERON:0007135!2.88e-08!57;UBERON:0004905!5.08e-07!5;UBERON:0000982!5.08e-07!5;UBERON:0004770!5.08e-07!5;UBERON:0005174!5.38e-07!5;UBERON:0001137!5.38e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;5.96e-34;3!UBERON:0007616;5.96e-34;3!UBERON:0002217;5.96e-34;3!UBERON:0002018;5.96e-34;3!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9!UBERON:0000486;1.33e-09;12!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0006915;5.96e-34;3!UBERON:0007616;5.96e-34;3!UBERON:0002217;5.96e-34;3!UBERON:0002018;5.96e-34;3!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9!UBERON:0000486;1.33e-09;12!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.96e-34,3;UBERON:0007616,5.96e-34,3;UBERON:0002217,5.96e-34,3;UBERON:0002018,5.96e-34,3;UBERON:0004905,1.07e-13,8;UBERON:0000982,1.07e-13,8;UBERON:0004770,1.07e-13,8;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p3@SKOR1 | |short_description=p3@SKOR1 | ||
}} | }} |
Latest revision as of 17:57, 18 September 2015
Short description: | p3@SKOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SKOR1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | 0bp_to_ENST00000554054_5end |
EntrezGene: | SKOR1 |
HGNC: | 21326 |
UniProt: | G3V5H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
synovial cell | 5.96e-34 | 3 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
extracellular matrix secreting cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.96e-34 | 3 |
layer of synovial tissue | 5.96e-34 | 3 |
synovial joint | 5.96e-34 | 3 |
synovial membrane of synovial joint | 5.96e-34 | 3 |
articulation | 1.07e-13 | 8 |
skeletal joint | 1.07e-13 | 8 |
articular system | 1.07e-13 | 8 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |