FFCP PHASE1:Hg19::chr1:6260896..6260907,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10315 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000497965_5end | |||
|cluster_id=chr1:6260896..6260907,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_13_at_RPL22_5end | |||
|id=chr1:6260896..6260907,- | |||
|ontology_enrichment_celltype=CL:0002322!3.02e-32!5;CL:0000039!2.76e-15!7;CL:0000586!2.76e-15!7;CL:0000540!1.92e-10!6;CL:0000031!1.92e-10!6;CL:0000404!1.92e-10!6;CL:0000047!6.08e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.46e-57;5!CL:0000039;3.68e-24;7!CL:0000586;3.68e-24;7!CL:0002321;1.99e-19;15!CL:0000540;4.26e-13;6!CL:0000404;4.26e-13;6!CL:0000148;3.69e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.77e-57,5;CL:0000039,3.83e-24,7;CL:0000586,3.83e-24,7;CL:0000540,3.77e-13,6;CL:0000031,3.77e-13,6;CL:0000404,3.77e-13,6;CL:0000047,4.22e-10,8;CL:0000148,4.04e-08,10;CL:0000541,4.04e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.90e-17;10!UBERON:0005564;3.90e-17;10!CL:0000031;4.26e-13;6 | |||
|ontology_enrichment_disease=DOID:3095!3.75e-10!22;DOID:2994!3.75e-10!22;DOID:2531!2.39e-08!51;DOID:0060083!2.39e-08!51;DOID:1799!1.58e-07!1;DOID:10165!1.58e-07!1;DOID:1798!1.58e-07!1;DOID:12603!2.04e-07!1;DOID:8552!2.31e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.98e-08;22!DOID:2994;3.98e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.16e-13!8;UBERON:0003135!9.07e-10!11;UBERON:0000991!1.36e-07!21;UBERON:0009196!1.36e-07!21;UBERON:0009117!1.36e-07!21;UBERON:0005564!1.36e-07!21;UBERON:0004176!3.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.09e-21;8!UBERON:0003135;1.22e-15;11!UBERON:0000922;4.25e-10;49!UBERON:0000991;1.74e-08;21!UBERON:0003101;3.98e-08;22!UBERON:0000079;3.98e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.20e-21,8;UBERON:0003135,1.25e-15,11;UBERON:0000991,1.76e-08,21;UBERON:0009196,1.76e-08,21;UBERON:0009117,1.76e-08,21;UBERON:0005564,1.76e-08,21;UBERON:0004176,4.03e-08,22;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,1.45782745153634,1.16193942869518,0.518305275076852,2.01856680700503,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0,1.27541018183058,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,2.47570985875021,2.9080823662043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.98339014767326,0,3.05966489225945,2.40495664739004,4.59474497674225,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@RPL22 | |||
}} |
Latest revision as of 19:22, 18 September 2015
Short description: | p13@RPL22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RPL22_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000497965_5end |
EntrezGene: | RPL22 |
HGNC: | 10315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.77e-57 | 5 |
germ line cell | 3.83e-24 | 7 |
germ cell | 3.83e-24 | 7 |
neuron | 3.77e-13 | 6 |
neuroblast | 3.77e-13 | 6 |
electrically signaling cell | 3.77e-13 | 6 |
neuronal stem cell | 4.22e-10 | 8 |
melanocyte | 4.04e-08 | 10 |
melanoblast | 4.04e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 3.20e-21 | 8 |
male reproductive organ | 1.25e-15 | 11 |
gonad | 1.76e-08 | 21 |
indifferent external genitalia | 1.76e-08 | 21 |
indifferent gonad | 1.76e-08 | 21 |
gonad primordium | 1.76e-08 | 21 |
external genitalia | 4.03e-08 | 22 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |