FFCP PHASE1:Hg19::chr2:88752231..88752245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=344167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35123 | |HGNC=35123 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=-100bp_to_ENST00000398142_5end | |association_with_transcript=-100bp_to_ENST00000398142_5end | ||
|cluster_id=chr2:88752231..88752245,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_2_at_FOXI3_5end | |description=CAGE_peak_2_at_FOXI3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!1.91e-19!7;CL:0000586!1.91e-19!7;CL:0002322!1.39e-14!5;CL:0000047!3.15e-08!8;CL:0000540!1.39e-07!6;CL:0000031!1.39e-07!6;CL:0000404!1.39e-07!6;CL:0000066!2.20e-07!254 | |ontology_enrichment_celltype=CL:0000039!1.91e-19!7;CL:0000586!1.91e-19!7;CL:0002322!1.39e-14!5;CL:0000047!3.15e-08!8;CL:0000540!1.39e-07!6;CL:0000031!1.39e-07!6;CL:0000404!1.39e-07!6;CL:0000066!2.20e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.02e-54;7!CL:0000586;9.02e-54;7!CL:0002322;1.97e-39;5!CL:0002321;4.44e-13;15!CL:0000540;4.79e-12;6!CL:0000404;4.79e-12;6!CL:0000148;1.25e-07;10 | |ontology_enrichment_celltype_v019=CL:0000039;9.02e-54;7!CL:0000586;9.02e-54;7!CL:0002322;1.97e-39;5!CL:0002321;4.44e-13;15!CL:0000540;4.79e-12;6!CL:0000404;4.79e-12;6!CL:0000148;1.25e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-53,7;CL:0000586,1.14e-53,7;CL:0002322,2.05e-39,5;CL:0000540,4.79e-12,6;CL:0000031,4.79e-12,6;CL:0000404,4.79e-12,6;CL:0000047,3.66e-09,8;CL:0000148,1.28e-07,10;CL:0000541,1.28e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-19;10!UBERON:0005564;1.54e-19;10!CL:0000031;4.79e-12;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.54e-19;10!UBERON:0005564;1.54e-19;10!CL:0000031;4.79e-12;6 | ||
|ontology_enrichment_disease=DOID:3095!1.88e-15!22;DOID:2994!1.88e-15!22;DOID:0050687!2.17e-08!143;DOID:305!8.82e-08!106 | |ontology_enrichment_disease=DOID:3095!1.88e-15!22;DOID:2994!1.88e-15!22;DOID:0050687!2.17e-08!143;DOID:305!8.82e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.28e-33;22!DOID:2994;1.28e-33;22!DOID:1799;4.19e-09;1!DOID:10165;4.19e-09;1!DOID:1798;4.19e-09;1 | |ontology_enrichment_disease_v019=DOID:3095;1.28e-33;22!DOID:2994;1.28e-33;22!DOID:1799;4.19e-09;1!DOID:10165;4.19e-09;1!DOID:1798;4.19e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.32e-33,22;DOID:2994,1.32e-33,22;DOID:1799,4.54e-09,1;DOID:10165,4.54e-09,1;DOID:1798,4.54e-09,1;DOID:0050687,5.90e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.49e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!1.49e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.99e-16;8!UBERON:0000922;1.96e-12;49!UBERON:0003135;1.05e-11;11!UBERON:0000991;3.22e-09;21 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.99e-16;8!UBERON:0000922;1.96e-12;49!UBERON:0003135;1.05e-11;11!UBERON:0000991;3.22e-09;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.29e-16,8;UBERON:0003135,1.09e-11,11;UBERON:0000991,3.25e-09,21;UBERON:0009196,3.25e-09,21;UBERON:0009117,3.25e-09,21;UBERON:0005564,3.25e-09,21;UBERON:0004176,8.72e-09,22 | |||
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| ||
|short_description=p2@FOXI3 | |short_description=p2@FOXI3 | ||
}} | }} |
Latest revision as of 20:39, 18 September 2015
Short description: | p2@FOXI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXI3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -100bp_to_ENST00000398142_5end |
EntrezGene: | FOXI3 |
HGNC: | 35123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-53 | 7 |
germ cell | 1.14e-53 | 7 |
embryonic stem cell | 2.05e-39 | 5 |
neuron | 4.79e-12 | 6 |
neuroblast | 4.79e-12 | 6 |
electrically signaling cell | 4.79e-12 | 6 |
neuronal stem cell | 3.66e-09 | 8 |
melanocyte | 1.28e-07 | 10 |
melanoblast | 1.28e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 5.29e-16 | 8 |
male reproductive organ | 1.09e-11 | 11 |
gonad | 3.25e-09 | 21 |
indifferent external genitalia | 3.25e-09 | 21 |
indifferent gonad | 3.25e-09 | 21 |
gonad primordium | 3.25e-09 | 21 |
external genitalia | 8.72e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.32e-33 | 22 |
germ cell cancer | 1.32e-33 | 22 |
islet cell tumor | 4.54e-09 | 1 |
endocrine pancreas cancer | 4.54e-09 | 1 |
pancreatic endocrine carcinoma | 4.54e-09 | 1 |
cell type cancer | 5.90e-08 | 143 |