FFCP PHASE1:Hg19::chr2:88752256..88752265,-: Difference between revisions
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|id=chr2:88752256..88752265,-
|short_description=p3@FOXI3
|description=CAGE_peak_3_at_FOXI3_5end
|association_with_transcript=-125bp_to_ENST00000398142_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35123 | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=-125bp_to_ENST00000398142_5end | |||
|cluster_id=chr2:88752256..88752265,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_FOXI3_5end | |||
|id=chr2:88752256..88752265,- | |id=chr2:88752256..88752265,- | ||
|ontology_enrichment_celltype=CL:0000039!1.62e-24!7;CL:0000586!1.62e-24!7;CL:0002322!1.60e-18!5;CL:0000540!1.24e-09!6;CL:0000031!1.24e-09!6;CL:0000404!1.24e-09!6;CL:0000047!3.25e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.88e-51;5!CL:0000039;6.93e-51;7!CL:0000586;6.93e-51;7!CL:0002321;5.35e-17;15!CL:0000540;2.30e-15;6!CL:0000404;2.30e-15;6!CL:0000148;9.00e-10;10!CL:0000147;4.08e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.10e-51,7;CL:0000586,6.10e-51,7;CL:0002322,6.52e-51,5;CL:0000540,2.13e-15,6;CL:0000031,2.13e-15,6;CL:0000404,2.13e-15,6;CL:0000047,1.07e-11,8;CL:0000148,9.28e-10,10;CL:0000541,9.28e-10,10;CL:0000147,4.16e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.93e-25;10!UBERON:0005564;7.93e-25;10!CL:0000031;2.30e-15;6 | |||
|ontology_enrichment_disease=DOID:3095!2.70e-20!22;DOID:2994!2.70e-20!22;DOID:0050687!3.91e-10!143;DOID:305!1.43e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.03e-28;22!DOID:2994;5.03e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.77e-28,22;DOID:2994,4.77e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.55e-11!8;UBERON:0003135!9.65e-08!11;UBERON:0000991!3.82e-07!21;UBERON:0009196!3.82e-07!21;UBERON:0009117!3.82e-07!21;UBERON:0005564!3.82e-07!21;UBERON:0004176!9.01e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.62e-20;8!UBERON:0003135;9.57e-15;11!UBERON:0000922;1.17e-13;49!UBERON:0000991;8.49e-12;21!UBERON:0003101;1.81e-07;22!UBERON:0000079;1.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.62e-20,8;UBERON:0003135,9.57e-15,11;UBERON:0000991,8.21e-12,21;UBERON:0009196,8.21e-12,21;UBERON:0009117,8.21e-12,21;UBERON:0005564,8.21e-12,21;UBERON:0004176,2.86e-11,22;UBERON:0003101,1.81e-07,22;UBERON:0000079,1.81e-07,22;UBERON:0003133,4.71e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04934265323988,5.03613119621644,3.02104251460748,2.38420426535352,4.28945446488568,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97081688457631,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.447792613514241,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,2.53620294826866,3.32103284316157,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,1.05226393590145,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,2.33817042215297,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,1.06287460050841,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0.62041277132864,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0.11294608203896,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,2.64949492153666,0.98339014767326,0.380095503034311,2.95767606251747,4.27547848424897,1.65410819162721,1.0028301571695,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@FOXI3 | |short_description=p3@FOXI3 | ||
}} | }} |
Latest revision as of 20:41, 18 September 2015
Short description: | p3@FOXI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXI3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -125bp_to_ENST00000398142_5end |
EntrezGene: | FOXI3 |
HGNC: | 35123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.10e-51 | 7 |
germ cell | 6.10e-51 | 7 |
embryonic stem cell | 6.52e-51 | 5 |
neuron | 2.13e-15 | 6 |
neuroblast | 2.13e-15 | 6 |
electrically signaling cell | 2.13e-15 | 6 |
neuronal stem cell | 1.07e-11 | 8 |
melanocyte | 9.28e-10 | 10 |
melanoblast | 9.28e-10 | 10 |
pigment cell | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 3.62e-20 | 8 |
male reproductive organ | 9.57e-15 | 11 |
gonad | 8.21e-12 | 21 |
indifferent external genitalia | 8.21e-12 | 21 |
indifferent gonad | 8.21e-12 | 21 |
gonad primordium | 8.21e-12 | 21 |
external genitalia | 2.86e-11 | 22 |
male organism | 1.81e-07 | 22 |
male reproductive system | 1.81e-07 | 22 |
reproductive organ | 4.71e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.77e-28 | 22 |
germ cell cancer | 4.77e-28 | 22 |