FFCP PHASE1:Hg19::chr2:88991165..88991216,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:88991165..88991216,+ to FFCP PHASE1:Hg19::chr2:88991165..88991216,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22934 | |EntrezGene=22934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10297 | |HGNC=10297 | ||
|TSSclassifier=strong | |||
|UniProt=P49247 | |UniProt=P49247 | ||
|association_with_transcript=0bp_to_NM_144563,uc002ste.2_5end | |||
|cluster_id=chr2:88991165..88991216,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_RPIA_5end | |||
|id=chr2:88991165..88991216,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.13e-14!52;CL:0000542!1.20e-13!53;CL:0000051!1.20e-13!53;CL:0000084!1.81e-10!25;CL:0000827!1.81e-10!25;CL:0000791!7.98e-09!18;CL:0000789!7.98e-09!18;CL:0002420!7.98e-09!18;CL:0002419!7.98e-09!18;CL:0000790!7.98e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.94e-10;25!CL:0000791;7.62e-09;18!CL:0000789;7.62e-09;18!CL:0002419;7.62e-09;18!CL:0000542;6.13e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.13e-14,52;CL:0000542,1.20e-13,53;CL:0000051,1.20e-13,53;CL:0000084,1.81e-10,25;CL:0000827,1.81e-10,25;CL:0000791,7.98e-09,18;CL:0000789,7.98e-09,18;CL:0002420,7.98e-09,18;CL:0002419,7.98e-09,18;CL:0000790,7.98e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.62e-09;18!CL:0000051;6.13e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPIA | |||
}} | }} |
Latest revision as of 20:58, 18 September 2015
Short description: | p1@RPIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPIA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_NM_144563, uc002ste.2_5end |
EntrezGene: | RPIA |
HGNC: | 10297 |
UniProt: | P49247 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.13e-14 | 52 |
lymphocyte | 1.20e-13 | 53 |
common lymphoid progenitor | 1.20e-13 | 53 |
T cell | 1.81e-10 | 25 |
pro-T cell | 1.81e-10 | 25 |
mature alpha-beta T cell | 7.98e-09 | 18 |
alpha-beta T cell | 7.98e-09 | 18 |
immature T cell | 7.98e-09 | 18 |
mature T cell | 7.98e-09 | 18 |
immature alpha-beta T cell | 7.98e-09 | 18 |