FFCP PHASE1:Hg19::chr1:177939093..177939102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89866 | |EntrezGene=89866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30301 | |HGNC=30301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000486567_5end | |association_with_transcript=-36bp_to_ENST00000486567_5end | ||
|cluster_id=chr1:177939093..177939102,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_14_at_SEC16B_5end | |description=CAGE_peak_14_at_SEC16B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!6.92e-18!12;CL:0000417!6.92e-18!12;CL:0000668!6.92e-18!12;CL:0000414!6.92e-18!12;CL:0000412!6.92e-18!12;CL:0000182!6.92e-18!12;CL:0002563!3.85e-14!4;CL:0002253!7.52e-08!2;CL:0000223!9.45e-08!59 | |ontology_enrichment_celltype=CL:0000181!6.92e-18!12;CL:0000417!6.92e-18!12;CL:0000668!6.92e-18!12;CL:0000414!6.92e-18!12;CL:0000412!6.92e-18!12;CL:0000182!6.92e-18!12;CL:0002563!3.85e-14!4;CL:0002253!7.52e-08!2;CL:0000223!9.45e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.36e-14;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.36e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.59e-14,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!8.04e-08!2 | |ontology_enrichment_disease=DOID:3493!8.04e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@SEC16B | |short_description=p14@SEC16B | ||
}} | }} |
Latest revision as of 21:04, 18 September 2015
Short description: | p14@SEC16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SEC16B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -36bp_to_ENST00000486567_5end |
EntrezGene: | SEC16B |
HGNC: | 30301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.59e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-19 | 19 |
digestive gland | 1.91e-19 | 19 |
liver bud | 1.91e-19 | 19 |
hepatic diverticulum | 6.38e-17 | 22 |
liver primordium | 6.38e-17 | 22 |
digestive tract diverticulum | 3.17e-16 | 23 |
epithelial sac | 5.33e-15 | 25 |
epithelium of foregut-midgut junction | 5.33e-15 | 25 |
anatomical boundary | 5.33e-15 | 25 |
hepatobiliary system | 5.33e-15 | 25 |
foregut-midgut junction | 5.33e-15 | 25 |
septum transversum | 5.33e-15 | 25 |
sac | 1.86e-14 | 26 |
exocrine gland | 2.90e-12 | 31 |
exocrine system | 2.90e-12 | 31 |
endocrine gland | 5.87e-11 | 35 |
intestine | 6.79e-10 | 17 |
small intestine | 2.53e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
endocrine system | 1.07e-08 | 45 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gut epithelium | 2.27e-07 | 54 |
abdomen element | 2.27e-07 | 54 |
abdominal segment element | 2.27e-07 | 54 |
gastrointestinal system | 3.78e-07 | 25 |
gland | 8.33e-07 | 59 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |