FFCP PHASE1:Hg19::chr1:178693977..178693988,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30279 | |||
|TSSclassifier=strong | |||
|UniProt=Q86X27 | |||
|association_with_transcript=-311bp_to_ENST00000367635,ENST00000495034,NM_152663,uc001gly.1,uc001glz.2,uc010pnb.1_5end | |||
|cluster_id=chr1:178693977..178693988,+ | |||
|description=CAGE_peak_4_at_RALGPS2_5end | |||
|id=chr1:178693977..178693988,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.76e-07!12;CL:0000417!6.76e-07!12;CL:0000668!6.76e-07!12;CL:0000414!6.76e-07!12;CL:0000412!6.76e-07!12;CL:0000182!6.76e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.42e-08;12!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.29e-08,12;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.94e-07!23;UBERON:0004921!9.94e-07!129;UBERON:0004185!9.94e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.48e-11;19!UBERON:0006925;3.48e-11;19!UBERON:0002423;1.19e-08;25!UBERON:0002365;2.63e-07;31!UBERON:0002330;2.63e-07;31!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-11,19;UBERON:0006925,3.31e-11,19;UBERON:0008836,3.31e-11,19;UBERON:0008835,9.12e-10,22;UBERON:0003894,9.12e-10,22;UBERON:0009854,2.28e-09,23;UBERON:0007499,1.14e-08,25;UBERON:0009497,1.14e-08,25;UBERON:0000015,1.14e-08,25;UBERON:0002423,1.14e-08,25;UBERON:0006235,1.14e-08,25;UBERON:0004161,1.14e-08,25;UBERON:0009856,2.34e-08,26;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31;UBERON:0010077,9.63e-07,4;UBERON:0005389,9.63e-07,4;UBERON:0000484,9.63e-07,4;UBERON:0002546,9.63e-07,4;UBERON:0000965,9.63e-07,4;UBERON:0001803,9.63e-07,4;UBERON:0003073,9.63e-07,4;UBERON:0005426,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.450970258243478,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.329663433524666,0.202210631562555,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,2.34483573884932,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.9164274741762,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0.219881033490858,0,1.69783147837478,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0.458729283404541,0,0.315543124386369,0,0,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@RALGPS2 | |||
}} |
Latest revision as of 21:43, 18 September 2015
Short description: | p4@RALGPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RALGPS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -311bp_to_ENST00000367635, ENST00000495034, NM_152663, uc001gly.1, uc001glz.2, uc010pnb.1_5end |
EntrezGene: | RALGPS2 |
HGNC: | 30279 |
UniProt: | Q86X27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.29e-08 | 12 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-11 | 19 |
digestive gland | 3.31e-11 | 19 |
liver bud | 3.31e-11 | 19 |
hepatic diverticulum | 9.12e-10 | 22 |
liver primordium | 9.12e-10 | 22 |
digestive tract diverticulum | 2.28e-09 | 23 |
epithelial sac | 1.14e-08 | 25 |
epithelium of foregut-midgut junction | 1.14e-08 | 25 |
anatomical boundary | 1.14e-08 | 25 |
hepatobiliary system | 1.14e-08 | 25 |
foregut-midgut junction | 1.14e-08 | 25 |
septum transversum | 1.14e-08 | 25 |
sac | 2.34e-08 | 26 |
exocrine gland | 4.21e-07 | 31 |
exocrine system | 4.21e-07 | 31 |
cuboidal epithelium | 9.63e-07 | 4 |
transparent eye structure | 9.63e-07 | 4 |
simple cuboidal epithelium | 9.63e-07 | 4 |
cranial placode | 9.63e-07 | 4 |
lens of camera-type eye | 9.63e-07 | 4 |
epithelium of lens | 9.63e-07 | 4 |
lens placode | 9.63e-07 | 4 |
lens vesicle | 9.63e-07 | 4 |