FFCP PHASE1:Hg19::chr12:52579527..52579538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |EntrezGene=144501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |HGNC=27056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466011,uc001rzw.2_5end | |association_with_transcript=0bp_to_ENST00000466011,uc001rzw.2_5end | ||
|cluster_id=chr12:52579527..52579538,- | |||
|coexpression_cluster_id=C2214 | |coexpression_cluster_id=C2214 | ||
|description=CAGE_peak_5_at_KRT80_5end | |description=CAGE_peak_5_at_KRT80_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!2.13e-13!254;CL:0000076!2.47e-11!62;CL:0002586!2.67e-09!3;CL:0002150!3.41e-09!3;CL:0000861!3.41e-09!3;CL:0002618!1.73e-07!3;CL:0000149!4.82e-07!4 | |ontology_enrichment_celltype=CL:0000066!2.13e-13!254;CL:0000076!2.47e-11!62;CL:0002586!2.67e-09!3;CL:0002150!3.41e-09!3;CL:0000861!3.41e-09!3;CL:0002618!1.73e-07!3;CL:0000149!4.82e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.05e-14;3!CL:0000149;4.80e-11;4!CL:0000077;9.44e-09;19 | |ontology_enrichment_celltype_v019=CL:0002586;2.05e-14;3!CL:0000149;4.80e-11;4!CL:0000077;9.44e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.41e-14,3;CL:0000149,3.64e-11,4;CL:0000077,8.79e-09,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,3.46e-07,235;DOID:14566,5.48e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.39e-18!9;UBERON:0001557!1.52e-09!19;UBERON:0001781!2.67e-09!3;UBERON:0001782!2.67e-09!3;UBERON:0005424!2.67e-09!3;UBERON:0007625!2.50e-08!11 | |ontology_enrichment_uberon=UBERON:0001737!5.39e-18!9;UBERON:0001557!1.52e-09!19;UBERON:0001781!2.67e-09!3;UBERON:0001782!2.67e-09!3;UBERON:0005424!2.67e-09!3;UBERON:0007625!2.50e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.05e-14;3!UBERON:0001782;2.05e-14;3!UBERON:0000966;5.17e-09;5!UBERON:0005388;5.17e-09;5!UBERON:0001802;5.17e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0001781;2.05e-14;3!UBERON:0001782;2.05e-14;3!UBERON:0000966;5.17e-09;5!UBERON:0005388;5.17e-09;5!UBERON:0001802;5.17e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.41e-14,3;UBERON:0005424,1.41e-14,3;UBERON:0001781,3.64e-11,4;UBERON:0000966,9.90e-08,6;UBERON:0005388,9.90e-08,6;UBERON:0001802,9.90e-08,6 | |||
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| ||
|short_description=p5@KRT80 | |short_description=p5@KRT80 | ||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p5@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT80_5end |
Coexpression cluster: | C2214_Retinal_mesothelioma_anaplastic_glioblastoma_immature_ductal_cervical |
Association with transcript: | 0bp_to_ENST00000466011, uc001rzw.2_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.41e-14 | 3 |
visual pigment cell | 3.64e-11 | 4 |
mesothelial cell | 8.79e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.41e-14 | 3 |
presumptive retinal pigmented epithelium | 1.41e-14 | 3 |
layer of retina | 3.64e-11 | 4 |
retina | 9.90e-08 | 6 |
photoreceptor array | 9.90e-08 | 6 |
posterior segment of eyeball | 9.90e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.46e-07 | 235 |
disease of cellular proliferation | 5.48e-07 | 239 |