FFCP PHASE1:Hg19::chr11:62609209..62609246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54663 | |EntrezGene=54663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10152,25529 | |HGNC=10152,25529 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYL6,Q6RFH5 | |UniProt=F5GYL6,Q6RFH5 | ||
|association_with_transcript=34bp_to_ENST00000410396,ENST00000525239,ENST00000538098,uc009yoi.1_5end | |association_with_transcript=34bp_to_ENST00000410396,ENST00000525239,ENST00000538098,uc009yoi.1_5end | ||
|cluster_id=chr11:62609209..62609246,- | |||
|description=CAGE_peak_2_at_RNU2-2_5end,CAGE_peak_3_at_WDR74_5end | |description=CAGE_peak_2_at_RNU2-2_5end,CAGE_peak_3_at_WDR74_5end | ||
|id=chr11:62609209..62609246,- | |id=chr11:62609209..62609246,- | ||
|ontology_enrichment_celltype=CL:0000860!6.42e-13!45;CL:0002057!3.21e-12!42;CL:0000763!4.62e-12!112;CL:0000049!4.62e-12!112;CL:0002009!8.94e-11!65;CL:0002194!9.46e-11!63;CL:0000576!9.46e-11!63;CL:0000040!9.46e-11!63;CL:0000559!9.46e-11!63;CL:0000839!1.12e-10!70;CL:0000557!1.47e-10!71;CL:0000766!6.11e-09!76;CL:0000037!7.47e-08!172;CL:0000566!7.47e-08!172;CL:0002032!1.86e-07!165;CL:0000837!1.86e-07!165;CL:0000988!2.12e-07!182 | |ontology_enrichment_celltype=CL:0000860!6.42e-13!45;CL:0002057!3.21e-12!42;CL:0000763!4.62e-12!112;CL:0000049!4.62e-12!112;CL:0002009!8.94e-11!65;CL:0002194!9.46e-11!63;CL:0000576!9.46e-11!63;CL:0000040!9.46e-11!63;CL:0000559!9.46e-11!63;CL:0000839!1.12e-10!70;CL:0000557!1.47e-10!71;CL:0000766!6.11e-09!76;CL:0000037!7.47e-08!172;CL:0000566!7.47e-08!172;CL:0002032!1.86e-07!165;CL:0000837!1.86e-07!165;CL:0000988!2.12e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.73e-10;33!CL:0002057;2.73e-10;33!CL:0000473;4.86e-07;39!CL:0000234;4.86e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.23e-10,42;CL:0002057,5.23e-10,42;CL:0000473,2.54e-09,48;CL:0000234,2.54e-09,48;CL:0002009,8.59e-09,61;CL:0000557,1.63e-08,67;CL:0002194,3.24e-08,59;CL:0000576,3.24e-08,59;CL:0000040,3.24e-08,59;CL:0000559,3.24e-08,59;CL:0000763,5.09e-08,108;CL:0000049,5.09e-08,108;CL:0000839,9.34e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-07;42 | |||
|ontology_enrichment_disease=DOID:162!1.74e-15!235;DOID:14566!4.31e-14!239;DOID:0050687!1.87e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.67e-07,235;DOID:14566,6.67e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.91e-08!80;UBERON:0001474!6.02e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.994192127183747,0,0,0.730310090387373,0,0,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0.627713197974014,0,0.328402357799783,0.236132343941038,0.786728553697808,0,0.464448369948228,0.919421224478927,0.6024118375565,1.47901604066715,0.387336002901508,0,0.587200878669695,2.21598163412751,0.802177789880567,3.47217393145363,0.447830948479849,0,0.257575567634187,0.872389432677388,0.377875943688809,0.727752183563449,1.39457422143411,1.23350366406548,0.929119112685311,2.01384674625505,2.30544635876191,2.12834006899727,2.41321976515633,1.93645405075148,0,0.941211697713023,0.545812300115692,0.224723484445085,2.75475503133812,1.92557416245656,6.39337125799041,0.989553900560148,1.39624560335142,0.852449501065388,0.290209238628584,2.26954089876456,2.4912889959823,1.25624332628372,0.521482918420201,1.08594422352558,0.605399502633369,1.47311054395026,0.949387162322653,0,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0,0,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0.520237390239513,1.31550323682941,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0.724122019413995,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.966182642624386,0,0.364295288292542,0.741568885568859,0.324547393654683,0,0.531831842075461,0.238490624305342,0.571994910780128,0,0,2.58070378531837,0.347140501607594,0,0.838998872419812,0.275118041940067,0.626984899610432,0,0,0,0,0,1.22031028774085,0,0,0,0.22452937262617,0.788280363383256,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0,0.264818361626438,0.573673241497627,1.06400514659507,0,0,0.98667019366864,0.311211035399766,0.808264032418128,0.326923806226917,0,0.576175924479999,0,0,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.365921118388786,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0.337169380156203,0,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0.301586917234893,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0,1.58040879591855,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,1.53353071666084,0,0.176096868026452,0.207328115540772,3.747118788841,0.6312121671319,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,6.762422020448,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0,0,0,1.12085143993527,0,0,0.898401253958239,0,0,0,0,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,1.47495334833363,0,0.195801157462741,0.343143423810856,0,0.431428401637234,0.960548020230999,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0.697262270759755,0,0.200506470303285,0.552485933615378,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,0,0,0.671624264166535,0.438519753291869,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0.462145851343933,0.767518373630648,0.413509717453592,0,0.145016693914229,0.340906509664404,0.0890320356467374,0,0.768760269460425,0.382838137483752,1.0115778085555,0,0,0,0,0,0,0,1.28812398067792,0,0,0,0,0,0,2.35484592059769,0,0.274537029736055,0.589062011728432,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0.192444225451024,2.01090682660736,1.08890984861323,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,0,0,0.144269212976445,0,0,0.997896857164083,0,0.211673582723883,1.29848776109822,0,1.14117339516596,0.313359791546046,0,0.338583555603207,0.321176150207399,0.80719882876419,1.70338495076131,0.687010689511529,0,0.223676107892416,0,0.19538809540204,2.22724939116194,0,0.540911356951966,1.33228787199128,7.04935025439248,1.49712432326576,0,1.21360521749513,0.334330152832435,2.55722532125772,0.23874448473769,0,0.307160702099232,0.994147647766298,0.703347082052564,0.111308705022906,1.48323486804084,1.68900326502395,0.19924798825107,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,2.86470537193757,0.524759999977174,0,1.0241410345695,5.08507300585533,3.54581522651905,1.37897349296586,1.45802306691627,0.347249989866585,0,0.361789315876224,1.52581736317083,0.552896299656123,0,0,0.21787692703798,0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| ||
|short_description=p2@RNU2-2,p3@WDR74 | |short_description=p2@RNU2-2,p3@WDR74 | ||
}} | }} |
Latest revision as of 21:47, 18 September 2015
Short description: | p2@RNU2-2, p3@WDR74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNU2-2_5end, CAGE_peak_3_at_WDR74_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000410396, ENST00000525239, ENST00000538098, uc009yoi.1_5end |
EntrezGene: | WDR74 |
HGNC: | 25529&submit=Submit 10152, 25529 |
UniProt: | F5GYL6Q6RFH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.23e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-10 | 42 |
defensive cell | 2.54e-09 | 48 |
phagocyte | 2.54e-09 | 48 |
macrophage dendritic cell progenitor | 8.59e-09 | 61 |
granulocyte monocyte progenitor cell | 1.63e-08 | 67 |
monopoietic cell | 3.24e-08 | 59 |
monocyte | 3.24e-08 | 59 |
monoblast | 3.24e-08 | 59 |
promonocyte | 3.24e-08 | 59 |
myeloid cell | 5.09e-08 | 108 |
common myeloid progenitor | 5.09e-08 | 108 |
myeloid lineage restricted progenitor cell | 9.34e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.67e-07 | 235 |
disease of cellular proliferation | 6.67e-07 | 239 |