FFCP PHASE1:Hg19::chr1:6511322..6511327,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83715 | |EntrezGene=83715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |HGNC=13281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-390bp_to_ENST00000434576_5end | |association_with_transcript=-390bp_to_ENST00000434576_5end | ||
|cluster_id=chr1:6511322..6511327,+ | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_21_at_ESPN_5end | |description=CAGE_peak_21_at_ESPN_5end | ||
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|ontology_enrichment_celltype=CL:0002563!1.40e-11!4;CL:0000181!2.29e-08!12;CL:0000417!2.29e-08!12;CL:0000668!2.29e-08!12;CL:0000414!2.29e-08!12;CL:0000412!2.29e-08!12;CL:0000182!2.29e-08!12 | |ontology_enrichment_celltype=CL:0002563!1.40e-11!4;CL:0000181!2.29e-08!12;CL:0000417!2.29e-08!12;CL:0000668!2.29e-08!12;CL:0000414!2.29e-08!12;CL:0000412!2.29e-08!12;CL:0000182!2.29e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;3.42e-11;4 | |ontology_enrichment_celltype_v019=CL:0002563;3.42e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-20,17;UBERON:0005409,1.62e-14,25;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0002108,2.74e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0003929,2.17e-07,54;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p21@ESPN | |short_description=p21@ESPN | ||
}} | }} |
Latest revision as of 21:50, 18 September 2015
Short description: | p21@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ESPN_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -390bp_to_ENST00000434576_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-20 | 17 |
gastrointestinal system | 1.62e-14 | 25 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
liver | 2.26e-09 | 19 |
digestive gland | 2.26e-09 | 19 |
liver bud | 2.26e-09 | 19 |
small intestine | 2.74e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
hepatic diverticulum | 3.15e-08 | 22 |
liver primordium | 3.15e-08 | 22 |
digestive tract diverticulum | 6.52e-08 | 23 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gut epithelium | 2.17e-07 | 54 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
sac | 4.15e-07 | 26 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |