FFCP PHASE1:Hg19::chr12:52626580..52626598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3855 | |EntrezGene=3855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |HGNC=6445 | ||
|TSSclassifier=strong | |||
|UniProt=P08729 | |UniProt=P08729 | ||
|association_with_transcript=-299bp_to_ENST00000331817_5end | |association_with_transcript=-299bp_to_ENST00000331817_5end | ||
|cluster_id=chr12:52626580..52626598,+ | |||
|coexpression_cluster_id=C3290 | |||
|description=CAGE_peak_8_at_KRT7_5end | |description=CAGE_peak_8_at_KRT7_5end | ||
|id=chr12:52626580..52626598,+ | |id=chr12:52626580..52626598,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.71e-24!254;CL:0000213!3.94e-23!57;CL:0000215!3.94e-23!57;CL:0002139!4.48e-15!24;CL:0002078!1.92e-14!44;CL:0000076!4.32e-14!62;CL:0000077!6.89e-13!19;CL:0000222!1.75e-12!119;CL:0000071!7.44e-12!18;CL:0002546!7.44e-12!18;CL:0000115!2.00e-11!35;CL:0000063!2.19e-10!578;CL:1000413!2.26e-09!9;CL:0000548!2.63e-09!679;CL:0000004!2.63e-09!679;CL:0000255!2.63e-09!679;CL:0000012!5.20e-09!682;CL:0000220!9.82e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.71e-24!254;CL:0000213!3.94e-23!57;CL:0000215!3.94e-23!57;CL:0002139!4.48e-15!24;CL:0002078!1.92e-14!44;CL:0000076!4.32e-14!62;CL:0000077!6.89e-13!19;CL:0000222!1.75e-12!119;CL:0000071!7.44e-12!18;CL:0002546!7.44e-12!18;CL:0000115!2.00e-11!35;CL:0000063!2.19e-10!578;CL:1000413!2.26e-09!9;CL:0000548!2.63e-09!679;CL:0000004!2.63e-09!679;CL:0000255!2.63e-09!679;CL:0000012!5.20e-09!682;CL:0000220!9.82e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.83e-15;19!CL:0000071;4.54e-14;18!CL:1000413;7.57e-13;9!CL:0000213;6.96e-12;58!CL:0000215;6.96e-12;58!CL:0002139;1.13e-11;24!CL:0000115;1.45e-09;36!CL:0002078;1.56e-08;45!CL:0000076;2.39e-08;63!CL:0002334;3.15e-08;12!CL:0002586;5.37e-08;3!CL:0002580;2.01e-07;3!CL:0002579;6.53e-07;3!CL:0002544;7.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.04e-26,58;CL:0000215,8.04e-26,58;CL:0000076,1.27e-16,63;CL:0000077,1.77e-15,19;CL:0000066,3.39e-15,253;CL:0000071,4.94e-14,18;CL:0002546,4.94e-14,18;CL:1000413,8.73e-13,9;CL:0002078,6.12e-12,45;CL:0002139,1.22e-11,24;CL:0000115,5.26e-11,36;CL:0000222,1.20e-10,121;CL:0002334,3.71e-08,12;CL:0002586,4.32e-08,3;CL:0002580,2.09e-07,3;CL:0002544,8.14e-07,6;CL:0002579,8.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.54e-14;18!UBERON:0007123;5.70e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006914!4.80e-14!25;UBERON:0000487!1.68e-13!22;UBERON:0001986!7.44e-12!18;UBERON:0004638!7.44e-12!18;UBERON:0004852!7.44e-12!18;UBERON:0007625!1.35e-09!11;UBERON:0003915!2.26e-09!9;UBERON:0004700!2.26e-09!9;UBERON:0001917!2.26e-09!9;UBERON:0002049!2.94e-09!79;UBERON:0007798!2.94e-09!79;UBERON:0001048!3.15e-09!168;UBERON:0003914!5.80e-09!118;UBERON:0000477!8.72e-09!286;UBERON:0003886!6.89e-08!63;UBERON:0000063!9.35e-08!97;UBERON:0004872!3.96e-07!84;UBERON:0000055!4.31e-07!69;UBERON:0004535!9.29e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;3.83e-20;25!UBERON:0000487;3.98e-18;22!UBERON:0007625;4.13e-16;11!UBERON:0000490;1.29e-15;33!UBERON:0004638;4.54e-14;18!UBERON:0001986;4.54e-14;18!UBERON:0004852;4.54e-14;18!UBERON:0003915;7.57e-13;9!UBERON:0004700;7.57e-13;9!UBERON:0001917;7.57e-13;9!UBERON:0000019;1.69e-08;19!UBERON:0000047;1.69e-08;19!UBERON:0004088;1.69e-08;19!UBERON:0010230;1.69e-08;19!UBERON:0000020;3.54e-08;23!UBERON:0001781;5.37e-08;3!UBERON:0001782;5.37e-08;3!UBERON:0000970;5.57e-08;20!UBERON:0002046;5.70e-08;5!UBERON:0004457;7.01e-08;9!UBERON:0000042;7.01e-08;9!UBERON:0001032;9.55e-08;24!UBERON:0004456;9.55e-08;24!UBERON:0002104;1.64e-07;21!UBERON:0001456;1.64e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,5.62e-20,25;UBERON:0000487,4.56e-18,22;UBERON:0007625,2.41e-16,11;UBERON:0004638,4.94e-14,18;UBERON:0001986,4.94e-14,18;UBERON:0004852,4.94e-14,18;UBERON:0003915,8.73e-13,9;UBERON:0004700,8.73e-13,9;UBERON:0001917,8.73e-13,9;UBERON:0000019,4.26e-08,20;UBERON:0000047,4.26e-08,20;UBERON:0010312,4.26e-08,20;UBERON:0004088,4.26e-08,20;UBERON:0010230,4.26e-08,20;UBERON:0003072,4.26e-08,20;UBERON:0004128,4.26e-08,20;UBERON:0003071,4.26e-08,20;UBERON:0001782,4.32e-08,3;UBERON:0005424,4.32e-08,3;UBERON:0002046,5.18e-08,5;UBERON:0004117,5.18e-08,5;UBERON:0007689,5.18e-08,5;UBERON:0007123,5.18e-08,5;UBERON:0003091,5.18e-08,5;UBERON:0000020,6.49e-08,24;UBERON:0001032,6.49e-08,24;UBERON:0004456,6.49e-08,24;UBERON:0000970,1.27e-07,21;UBERON:0002104,1.27e-07,21;UBERON:0001456,3.43e-07,22 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.704772020479856,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,3.44027511102112,13.2582221914761,1.52908960491121,2.63766978228454,0,0.331397375727916,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.80719576192283,1.50401373190767,3.47631645505977,0,0.486634870302636,0.756278537312543,3.54767035940102,2.81071314218003,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,3.4409383804245,3.12426451446835,4.52246353539208,10.9069853414576,11.5549577614828,2.29894463190492,0.775250277507987,0.35576626268671,1.33888245105868,4.02829317109147,1.52054421143703,0.976248230192678,0.367663080345869,18.6332648012805,0.0892997282840798,0.22452937262617,0,4.5994991239765,0,2.19842092716489,0,0,0.436094052142534,1.49091585508596,0.12663051166458,0,0.286836620748814,0.354668382198357,3.36406560085384,4.2699598291882,3.94668077467456,0,0.538842688278752,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0,0.453728732640084,0.717558542755448,0.640672166455702,0.211931901159562,0.300091096084402,0,0,0.558350568994769,1.35021065793013,1.16924406193438,0.252433774244115,0.368199594569197,0.969876340912871,0,0,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.709840800239063,0.505754070234305,1.44606617930089,0.220587945464788,1.30727666455444,0.474541238222193,0.674156540800822,0.392442930250692,0.38474715694639,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,1.88724591328378,0.109750285408626,0,0,0,0,0,4.3299402607582,0,3.17003474436719,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,3.48613383440118,5.29856853264902,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90289273817067,1.24900292158013,1.57702415033935,1.05427273493442,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0.303127571446259,3.32870879020994,3.93107381328584,2.48107807818777,2.455391572609,2.24528075546459,1.40953064181271,1.02341449813341,2.89537058058494,7.42090332224955,0,0,0,0,0.116210378459959,0,0.601519410909855,0,0.34444334449382,0,0.131124414959424,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.422206515571503,0,1.02056223165909,0.431831832204279,0,0.270946437543853,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0,0,1.53870075069834,22.9610251989794,9.11059505060049,0,0,0,0,0,4.82051789532479,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0.384380134730212,0.382838137483752,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0.294747123039363,0,0,1.05553817648832,1.31717957183961,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,1.68900326502395,0.398495976502139,0,0,0,0,0,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0.227884111694002,0,0.359030577639089,0.217294743844016,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,2.31694369112849,1.2557316736289,0,0,0,0,0,0.435296032902013,0,0,0.483781656445426,0.0730893170861856,0.328461828212837,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,1.26720403823288,0,0.191915197319445,0,0,0,0,0,0,8.38111340937412,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.63718706865481,0,0,0,0,1.5652351854352,0.601030435988874,1.14241563650639,0.406870733204662,0,1.71856891267982,0.464033759878494,0.796191777397232,0,0,0,0,0,0.857766365499703,4.4369029634086,2.04035332961045,0.463044948647668,4.40526068111642,8.41717553082991,1.54400723580486,1.31570429747224,0.353378291891762,2.31496845925098,0.337884881306145,0,4.14516410077438,4.25403938648335,0,0,0,0,0,3.44082072255207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84841065840541,0,0,0,0.0752103283492573,0,0,0.261906694481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| ||
|short_description=p8@KRT7 | |short_description=p8@KRT7 | ||
}} | }} |
Latest revision as of 21:56, 18 September 2015
Short description: | p8@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KRT7_5end |
Coexpression cluster: | C3290_Endothelial_Retinal_Alveolar_thyroid_papillary_anaplastic_Ciliary |
Association with transcript: | -299bp_to_ENST00000331817_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | P08729 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.04e-26 | 58 |
barrier cell | 8.04e-26 | 58 |
squamous epithelial cell | 1.27e-16 | 63 |
mesothelial cell | 1.77e-15 | 19 |
epithelial cell | 3.39e-15 | 253 |
blood vessel endothelial cell | 4.94e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.94e-14 | 18 |
endothelial cell of artery | 8.73e-13 | 9 |
meso-epithelial cell | 6.12e-12 | 45 |
endothelial cell of vascular tree | 1.22e-11 | 24 |
endothelial cell | 5.26e-11 | 36 |
mesodermal cell | 1.20e-10 | 121 |
preadipocyte | 3.71e-08 | 12 |
retinal pigment epithelial cell | 4.32e-08 | 3 |
preadipocyte of the breast | 2.09e-07 | 3 |
aortic endothelial cell | 8.14e-07 | 6 |
omentum preadipocyte | 8.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 5.62e-20 | 25 |
simple squamous epithelium | 4.56e-18 | 22 |
pigment epithelium of eye | 2.41e-16 | 11 |
blood vessel endothelium | 4.94e-14 | 18 |
endothelium | 4.94e-14 | 18 |
cardiovascular system endothelium | 4.94e-14 | 18 |
endothelial tube | 8.73e-13 | 9 |
arterial system endothelium | 8.73e-13 | 9 |
endothelium of artery | 8.73e-13 | 9 |
camera-type eye | 4.26e-08 | 20 |
simple eye | 4.26e-08 | 20 |
immature eye | 4.26e-08 | 20 |
ocular region | 4.26e-08 | 20 |
eyeball of camera-type eye | 4.26e-08 | 20 |
optic cup | 4.26e-08 | 20 |
optic vesicle | 4.26e-08 | 20 |
eye primordium | 4.26e-08 | 20 |
pigmented layer of retina | 4.32e-08 | 3 |
presumptive retinal pigmented epithelium | 4.32e-08 | 3 |
thyroid gland | 5.18e-08 | 5 |
pharyngeal pouch | 5.18e-08 | 5 |
thyroid diverticulum | 5.18e-08 | 5 |
pharyngeal pouch 2 | 5.18e-08 | 5 |
thyroid primordium | 5.18e-08 | 5 |
sense organ | 6.49e-08 | 24 |
sensory system | 6.49e-08 | 24 |
entire sense organ system | 6.49e-08 | 24 |
eye | 1.27e-07 | 21 |
visual system | 1.27e-07 | 21 |
face | 3.43e-07 | 22 |