FFCP PHASE1:Hg19::chr2:183291741..183291771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5136 | |EntrezGene=5136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8774 | |HGNC=8774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000351439,ENST00000409365,uc002uor.2_5end | |association_with_transcript=0bp_to_ENST00000351439,ENST00000409365,uc002uor.2_5end | ||
|cluster_id=chr2:183291741..183291771,- | |||
|coexpression_cluster_id=C4157 | |coexpression_cluster_id=C4157 | ||
|description=CAGE_peak_1_at_PDE1A_5end | |description=CAGE_peak_1_at_PDE1A_5end | ||
|id=chr2:183291741..183291771,- | |id=chr2:183291741..183291771,- | ||
|ontology_enrichment_celltype=CL:0000136!3.97e-10!15;CL:0002334!3.47e-08!12;CL:0000499!4.45e-08!27;CL:0000327!9.89e-07!14 | |ontology_enrichment_celltype=CL:0000136!3.97e-10!15;CL:0002334!3.47e-08!12;CL:0000499!4.45e-08!27;CL:0000327!9.89e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.09e-10;13!CL:0002334;6.77e-10;12!CL:0000499;1.68e-08;28!CL:0000327;1.89e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.67e-12,15;CL:0002334,7.18e-10,12;CL:0000499,1.45e-08,28;CL:0000327,1.96e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-20!115;UBERON:0000481!4.78e-12!347;UBERON:0007100!3.20e-09!27;UBERON:0000475!3.36e-08!365;UBERON:0001013!6.01e-08!14;UBERON:0000468!9.34e-08!659;UBERON:0000948!9.69e-08!24;UBERON:0005498!9.69e-08!24;UBERON:0004140!9.69e-08!24;UBERON:0009881!9.69e-08!24;UBERON:0004141!9.69e-08!24;UBERON:0003084!9.69e-08!24;UBERON:0007005!9.69e-08!24;UBERON:0004139!9.69e-08!24;UBERON:0004291!9.69e-08!24;UBERON:0003104!3.41e-07!238;UBERON:0009142!3.41e-07!238;UBERON:0000477!4.25e-07!286;UBERON:0001737!8.27e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.03e-20!115;UBERON:0000481!4.78e-12!347;UBERON:0007100!3.20e-09!27;UBERON:0000475!3.36e-08!365;UBERON:0001013!6.01e-08!14;UBERON:0000468!9.34e-08!659;UBERON:0000948!9.69e-08!24;UBERON:0005498!9.69e-08!24;UBERON:0004140!9.69e-08!24;UBERON:0009881!9.69e-08!24;UBERON:0004141!9.69e-08!24;UBERON:0003084!9.69e-08!24;UBERON:0007005!9.69e-08!24;UBERON:0004139!9.69e-08!24;UBERON:0004291!9.69e-08!24;UBERON:0003104!3.41e-07!238;UBERON:0009142!3.41e-07!238;UBERON:0000477!4.25e-07!286;UBERON:0001737!8.27e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.77e-10;25!UBERON:0001013;1.56e-08;14!UBERON:0004457;2.34e-08;9!UBERON:0000042;2.34e-08;9!UBERON:0001737;3.57e-08;9!UBERON:0001557;3.57e-08;9!UBERON:0000948;3.85e-08;22!UBERON:0001134;5.09e-08;16!UBERON:0002036;5.09e-08;16!UBERON:0004905;9.65e-07;8!UBERON:0000982;9.65e-07;8!UBERON:0004770;9.65e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.16e-17,114;UBERON:0007100,2.12e-10,27;UBERON:0000479,3.93e-09,773;UBERON:0001013,1.33e-08,14;UBERON:0000948,1.39e-08,24;UBERON:0005498,1.39e-08,24;UBERON:0004140,1.39e-08,24;UBERON:0009881,1.39e-08,24;UBERON:0004141,1.39e-08,24;UBERON:0003084,1.39e-08,24;UBERON:0007005,1.39e-08,24;UBERON:0004139,1.39e-08,24;UBERON:0004291,1.39e-08,24;UBERON:0001737,3.79e-08,9;UBERON:0004921,5.86e-08,118;UBERON:0004457,1.25e-07,12;UBERON:0000042,1.25e-07,12;UBERON:0011216,5.92e-07,223;UBERON:0001557,5.93e-07,19;UBERON:0003688,9.92e-07,6;UBERON:0002358,9.92e-07,6;UBERON:0003684,9.92e-07,6;UBERON:0001178,9.92e-07,6 | |||
|phase1_expression=70.6728895362465,23.3369571041172,77.6658766568801,33.024188456533,69.2789696362296,55.8296655424236,12.6649939084155,6.94891860769514,4.70134130759709,0,0,0,0,9.40624282496354,21.5408294223145,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,48.7613732627923,2.01210257911091,10.356867509326,36.1439152384566,49.1311152423172,83.7212879593561,7.95285947051099,8.27279279514481,0.0945348171640679,0,0,8.97206667159332,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0.12663051166458,0.132409180813219,2.29469296599051,1.06400514659507,12.3349072031308,1.06748995729705,0,76.8691257437423,5.52313755485721,5.06731899651722,1.81628913173918,1.72852777344,0,0.312160076830321,0,0.448346041655403,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,1.58805056424029,0.179389635688862,2.77624605464138,3.39091041855299,0,0,2.06112432036503,5.21127197728451,0.506328996723799,0,2.27190396819703,3.68199594569197,3.07127507955743,2.84007674013291,1.20902517873168,0.508681776931463,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,19.0390850493111,8.66255378003503,16.3263384054985,17.8699771482788,16.8707720918437,15.2205682370704,12.6370077573596,19.693461386221,13.7527934323368,14.3241669541503,16.1593805917484,0,0,6.9967581926338,4.41026134156626,1.26755034821831,0,7.08947888017685,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59737445815979,5.23152082599936,8.43390286940925,0,3.57656445851882,0.845302752556,3.45719551560332,5.2003718455683,0.257207374262142,0,0,86.0727521822048,3.25572963234866,0,1.62868092146868,87.7818113394088,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,22.9723871668228,4.27910715122155,1.30303176000821,11.9176267079222,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,77.2956397830581,16.5056271949693,4.06897535549603,0,0,0,0,7.52365249319297,0,4.1389228517002,0,0.368738337083406,1.65078867489357,0.587403472388222,0,0,0,0,0,1.66435439510497,1.5119514666484,43.9150819839235,19.7965945541601,19.9268667047482,52.0244945978146,17.9097537173346,8.84696566289841,25.2310712956485,4.78050050788232,14.027376299737,15.3577781745823,2.07701771673448,16.7342944982341,0,0,0,1.83703117063371,1.27463817604702,10.3588287817945,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0,0,1.28225062558195,0,0,10.4071421764199,0.0915694648183434,0,0,0,4.82051789532479,1.16004861950546,5.39170159901255,6.90766536267583,3.99726060205139,18.1540213827382,2.61030049045611,5.45450415463046,6.94449878044551,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.715624433709956,5.95453390975468,6.32758849437452,11.0565512475818,0,3.85145089230528,1.27281299170375,0,4.8565563547495,13.7268514868027,4.47687128913608,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,3.13949796238367,7.7772987574542,3.39024349860728,0,2.65375590096488,1.75380354101505,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0,0.0982490410131212,0,8.51426553769435,5.06658324714394,25.3557067579124,0,0,0,0,0,7.06078505825844,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,11.2811298039358,0.121360521749513,0,0,0.23874448473769,0.593929361665277,0,0.994147647766298,1.40669416410513,0.111308705022906,0,0,30.6841901906647,14.3667636076197,0,0,0,0,0,0,0,25.4499986543289,0,3.33410970433911,0,2.50473865036998,0,0,0,5.79999660347835,0,0.254253650292766,0.472775363535873,0,1.45802306691627,0.173624994933292,0.885741385813839,0.723578631752448,0,2.21158519862449,0.591095237907095,16.6732901837019,8.06144630040527,0,30.5492526260074,0.91153644677601,3.68902247020896,0.0897576444097721,0,0.957003479195758,0.549585560411174,0,0,0,0.498635045700469,0,0,0,0.569261198172555,0,0,0.163232808159148,0,0.432777279484182,4.97630965539252,11.1456531274207,14.0536933334734,0,0,0,1.07841812769083,8.02577647298789,0,0,0.19566461893209,0,7.49710365413842,15.7287930863263,1.53036380815245,27.7389084569062,0.150323419414493,0.622129148383483,0,0,0,0,1.42304773014896,0.277349346026277,0,0,0,15.7254001417827,1.20390222730132,0.483781656445426,0.950161122120412,0.656923656425674,12.7055611599829,0,8.3612874088797,0,0,1.70939149080872,0,0.160317640503067,35.0062911372538,0,0,0,0,0.288109595976299,0,0,0,0.523014231561666,0.407992870545287,0,0,1.09524303113594,0,1.71906176567983,0,20.6668976941468,31.6241385136123,10.7680953686522,6.38972801596772,16.739815877326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| ||
|short_description=p1@PDE1A | |short_description=p1@PDE1A | ||
}} | }} |
Latest revision as of 22:04, 18 September 2015
Short description: | p1@PDE1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE1A_5end |
Coexpression cluster: | C4157_Mesenchymal_mesenchymal_Fibroblast_Adipocyte_Chondrocyte_Nucleus_mesodermal |
Association with transcript: | 0bp_to_ENST00000351439, ENST00000409365, uc002uor.2_5end |
EntrezGene: | PDE1A |
HGNC: | 8774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.67e-12 | 15 |
preadipocyte | 7.18e-10 | 12 |
stromal cell | 1.45e-08 | 28 |
extracellular matrix secreting cell | 1.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.16e-17 | 114 |
primary circulatory organ | 2.12e-10 | 27 |
tissue | 3.93e-09 | 773 |
adipose tissue | 1.33e-08 | 14 |
heart | 1.39e-08 | 24 |
primitive heart tube | 1.39e-08 | 24 |
primary heart field | 1.39e-08 | 24 |
anterior lateral plate mesoderm | 1.39e-08 | 24 |
heart tube | 1.39e-08 | 24 |
heart primordium | 1.39e-08 | 24 |
cardiac mesoderm | 1.39e-08 | 24 |
cardiogenic plate | 1.39e-08 | 24 |
heart rudiment | 1.39e-08 | 24 |
larynx | 3.79e-08 | 9 |
subdivision of digestive tract | 5.86e-08 | 118 |
cavity lining | 1.25e-07 | 12 |
serous membrane | 1.25e-07 | 12 |
organ system subdivision | 5.92e-07 | 223 |
upper respiratory tract | 5.93e-07 | 19 |
omentum | 9.92e-07 | 6 |
peritoneum | 9.92e-07 | 6 |
abdominal cavity | 9.92e-07 | 6 |
visceral peritoneum | 9.92e-07 | 6 |