FFCP PHASE1:Hg19::chr12:52635300..52635325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3855 | |EntrezGene=3855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6445 | |HGNC=6445 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000552183_5end | |association_with_transcript=0bp_to_ENST00000552183_5end | ||
|cluster_id=chr12:52635300..52635325,+ | |||
|coexpression_cluster_id=C689 | |coexpression_cluster_id=C689 | ||
|description=CAGE_peak_9_at_KRT7_5end | |description=CAGE_peak_9_at_KRT7_5end |
Latest revision as of 22:04, 18 September 2015
Short description: | p9@KRT7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KRT7_5end |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | 0bp_to_ENST00000552183_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@KRT7 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.14e-17 | 253 |
chorionic membrane mesenchymal stem cell | 2.55e-16 | 3 |
respiratory epithelial cell | 2.51e-13 | 13 |
endo-epithelial cell | 6.31e-10 | 42 |
mesothelial cell | 3.17e-09 | 19 |
epithelial cell of tracheobronchial tree | 6.74e-09 | 9 |
epithelial cell of lower respiratory tract | 6.74e-09 | 9 |
retinal pigment epithelial cell | 8.17e-08 | 3 |
placental epithelial cell | 1.26e-07 | 3 |
epithelial cell of prostate | 1.44e-07 | 3 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
chorion | 1.33e-25 | 7 |
egg chorion | 2.55e-16 | 3 |
extraembryonic membrane | 1.65e-12 | 14 |
membranous layer | 1.65e-12 | 14 |
placenta | 1.07e-11 | 4 |
allantois | 1.07e-11 | 4 |
respiratory tract | 7.61e-09 | 54 |
respiratory primordium | 8.36e-09 | 38 |
endoderm of foregut | 8.36e-09 | 38 |
endoderm-derived structure | 1.31e-08 | 160 |
Showing 1 to 10 of 20 entries