FFCP PHASE1:Hg19::chr1:65344781..65344820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3716 | |EntrezGene=3716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6190 | |HGNC=6190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000467764_5end | |association_with_transcript=-35bp_to_ENST00000467764_5end | ||
|cluster_id=chr1:65344781..65344820,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_3_at_JAK1_5end | |description=CAGE_peak_3_at_JAK1_5end | ||
|id=chr1:65344781..65344820,- | |id=chr1:65344781..65344820,- | ||
|ontology_enrichment_celltype=CL:0002139!2.71e-16!24;CL:0000115!1.90e-12!35;CL:0000071!5.87e-12!18;CL:0002546!5.87e-12!18;CL:0002078!8.50e-11!44;CL:0000213!8.96e-11!57;CL:0000215!8.96e-11!57;CL:0002057!4.62e-09!42;CL:1000413!8.58e-08!9;CL:0000860!8.59e-08!45 | |ontology_enrichment_celltype=CL:0002139!2.71e-16!24;CL:0000115!1.90e-12!35;CL:0000071!5.87e-12!18;CL:0002546!5.87e-12!18;CL:0002078!8.50e-11!44;CL:0000213!8.96e-11!57;CL:0000215!8.96e-11!57;CL:0002057!4.62e-09!42;CL:1000413!8.58e-08!9;CL:0000860!8.59e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.55e-54;24!CL:0000115;4.96e-45;36!CL:0000071;2.09e-39;18!CL:0002078;8.95e-27;45!CL:1000413;4.31e-23;9!CL:0000213;1.78e-18;58!CL:0000215;1.78e-18;58!CL:0002138;1.29e-16;6!CL:0002544;4.86e-16;6!CL:0002543;1.09e-15;6!CL:0002618;3.73e-09;3!CL:0000775;1.34e-08;3!CL:0000094;6.81e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-54,24;CL:0000115,1.60e-51,36;CL:0002078,2.26e-42,45;CL:0000071,1.46e-39,18;CL:0002546,1.46e-39,18;CL:0000213,5.30e-31,58;CL:0000215,5.30e-31,58;CL:1000413,5.02e-23,9;CL:0005020,1.23e-16,6;CL:0002138,1.23e-16,6;CL:0005022,1.23e-16,6;CL:0002544,5.47e-16,6;CL:0002543,6.54e-16,6;CL:0000222,1.58e-14,121;CL:0002618,3.71e-09,3;CL:0000076,4.71e-09,63;CL:0000775,1.73e-08,3;CL:0000094,7.33e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002546;2.09e-39;18!CL:0005022;1.29e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.87e-12!18;UBERON:0004638!5.87e-12!18;UBERON:0004852!5.87e-12!18;UBERON:0006914!9.04e-09!25;UBERON:0000487!1.16e-08!22;UBERON:0003915!8.58e-08!9;UBERON:0004700!8.58e-08!9;UBERON:0001917!8.58e-08!9;UBERON:0000055!3.19e-07!69;UBERON:0003081!3.64e-07!216 | |ontology_enrichment_uberon=UBERON:0001986!5.87e-12!18;UBERON:0004638!5.87e-12!18;UBERON:0004852!5.87e-12!18;UBERON:0006914!9.04e-09!25;UBERON:0000487!1.16e-08!22;UBERON:0003915!8.58e-08!9;UBERON:0004700!8.58e-08!9;UBERON:0001917!8.58e-08!9;UBERON:0000055!3.19e-07!69;UBERON:0003081!3.64e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.09e-39;18!UBERON:0001986;2.09e-39;18!UBERON:0004852;2.09e-39;18!UBERON:0000487;2.60e-31;22!UBERON:0006914;6.03e-27;25!UBERON:0003915;4.31e-23;9!UBERON:0004700;4.31e-23;9!UBERON:0001917;4.31e-23;9!UBERON:0000490;1.55e-19;33!UBERON:0000055;5.26e-15;65!UBERON:0001638;2.15e-13;9!UBERON:0003920;2.15e-13;9!UBERON:0004582;2.15e-13;9!UBERON:0001473;3.18e-12;8!UBERON:0004536;3.18e-12;8!UBERON:0006558;3.18e-12;8!UBERON:0007500;1.33e-11;56!UBERON:0001981;1.33e-11;56!UBERON:0004537;1.33e-11;56!UBERON:0002049;5.23e-10;75!UBERON:0007798;5.23e-10;75!UBERON:0002465;1.37e-09;10!UBERON:0003914;8.27e-08;74!UBERON:0002050;1.08e-07;5!UBERON:0005423;1.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.46e-39,18;UBERON:0001986,1.46e-39,18;UBERON:0004852,1.46e-39,18;UBERON:0000487,1.94e-31,22;UBERON:0006914,4.68e-27,25;UBERON:0000055,1.14e-24,68;UBERON:0003915,5.02e-23,9;UBERON:0004700,5.02e-23,9;UBERON:0001917,5.02e-23,9;UBERON:0002049,2.06e-20,78;UBERON:0007798,2.06e-20,78;UBERON:0007500,4.75e-17,59;UBERON:0001981,4.75e-17,59;UBERON:0004537,4.75e-17,59;UBERON:0006965,4.75e-17,59;UBERON:0004535,1.65e-14,109;UBERON:0001009,6.83e-14,112;UBERON:0001638,1.21e-13,9;UBERON:0003920,1.21e-13,9;UBERON:0004582,1.21e-13,9;UBERON:0004872,1.42e-12,83;UBERON:0001473,3.07e-12,8;UBERON:0004536,3.07e-12,8;UBERON:0006558,3.07e-12,8;UBERON:0003081,1.14e-09,203;UBERON:0003914,1.18e-09,117;UBERON:0002465,1.33e-09,10 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0,0,1.09220686065086,1.05506791291381,0.247532705920093,0.662794751455832,2.6893005858071,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.568676929949686,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0.436194716338694,0.377875943688809,0.485168122375632,0.929716147622738,1.23350366406548,1.85823822537062,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.941211697713023,1.09162460023138,0.898893937780338,0.612167784741805,0.962787081228281,0,0.659702600373432,0.797854630486527,0.426224750532694,0.580418477257168,2.8369261234557,1.86846674698672,0.75374599577023,1.5644487552606,0.434377689410233,2.42159801053347,0.368277635987565,0.949387162322653,0,0.212604299965044,0,0,0.450530678524519,0.16072558669708,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,1.32208974556972,0,1.1384259382189,1.17447437874188,0.382273228125229,2.64342657158052,0,0.263384084775077,0.393419540227666,0.393010762749165,1.23360899399706,0.668745981562712,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0.512365278902701,0.650296737799391,0.986627427622057,0.552700035571697,0,0.296573126324121,0.535081656179426,0,0.226618685395132,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.473554504088034,0,0.403213486449465,1.06976078313403,1.01377082717959,0,0.670700859703636,0.511450247374121,0.722878304769133,0,0,0,0.486634870302636,0.189069634328136,0,0.527008714158756,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,0,0.371457501329565,8.34802110940161,3.4409383804245,8.67851254018986,6.21838736116411,7.55098985177831,4.12677062910101,3.9709043641994,18.864423419361,35.2208600059843,14.0582657361161,12.0848795132744,0,3.90499292077071,19.486143258331,2.43042584364528,11.5196649486463,8.98117490504679,11.5989824897822,3.06633274931766,1.89853131913626,4.58004359826018,1.31780417436063,7.75560528296651,0,0,0.506522046658319,0.529636723252875,0,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,1.1409436430889,0,0.23486899728753,0.161872944368132,0.421352420106746,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0.113432183160021,0,0,0.635795703478686,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0.234817388471643,8.95071976118658,7.87075371380238,7.80042024161853,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.517086863031111,0,2.535908257668,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,2.61460037580088,0.399891964728228,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.358121926479791,0.336255431980582,0.394061520403854,1.07813787429759,0.641715181398742,0,0,0,0.335032530668698,0,2.24702107184155,11.966458368161,2.07207756718018,0.36807447515742,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0.303127571446259,1.66435439510497,0.907170879989041,0.496215615637554,0,0.561320188866147,0.768834895534206,0,0.482561763430822,2.96836132889982,0.462629081407967,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.231046011313244,0.784349769176855,0,0.211103257785751,4.54933536283586,4.42243633718941,3.67057057373637,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0.48335359146061,0,0.15350367472613,0.551346289938122,0,0.435050081742686,0.511359764496605,0,0,0.192190067365106,0,0.708104465988849,0,0,0.6970372701606,0.308033580176089,0,0,0,0.572499546967965,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.471249609382746,0.202182481573316,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0.608731130888112,0,0,0.286822704408103,0,0,0,0.211107635297664,0.987884678879706,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.4764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| ||
|short_description=p3@JAK1 | |short_description=p3@JAK1 | ||
}} | }} |
Latest revision as of 22:05, 18 September 2015
Short description: | p3@JAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JAK1_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | -35bp_to_ENST00000467764_5end |
EntrezGene: | JAK1 |
HGNC: | 6190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-54 | 24 |
endothelial cell | 1.60e-51 | 36 |
meso-epithelial cell | 2.26e-42 | 45 |
blood vessel endothelial cell | 1.46e-39 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.46e-39 | 18 |
lining cell | 5.30e-31 | 58 |
barrier cell | 5.30e-31 | 58 |
endothelial cell of artery | 5.02e-23 | 9 |
lymphangioblast | 1.23e-16 | 6 |
endothelial cell of lymphatic vessel | 1.23e-16 | 6 |
vascular lymphangioblast | 1.23e-16 | 6 |
aortic endothelial cell | 5.47e-16 | 6 |
vein endothelial cell | 6.54e-16 | 6 |
mesodermal cell | 1.58e-14 | 121 |
endothelial cell of umbilical vein | 3.71e-09 | 3 |
squamous epithelial cell | 4.71e-09 | 63 |
neutrophil | 1.73e-08 | 3 |
granulocyte | 7.33e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.46e-39 | 18 |
endothelium | 1.46e-39 | 18 |
cardiovascular system endothelium | 1.46e-39 | 18 |
simple squamous epithelium | 1.94e-31 | 22 |
squamous epithelium | 4.68e-27 | 25 |
vessel | 1.14e-24 | 68 |
endothelial tube | 5.02e-23 | 9 |
arterial system endothelium | 5.02e-23 | 9 |
endothelium of artery | 5.02e-23 | 9 |
vasculature | 2.06e-20 | 78 |
vascular system | 2.06e-20 | 78 |
epithelial tube open at both ends | 4.75e-17 | 59 |
blood vessel | 4.75e-17 | 59 |
blood vasculature | 4.75e-17 | 59 |
vascular cord | 4.75e-17 | 59 |
cardiovascular system | 1.65e-14 | 109 |
circulatory system | 6.83e-14 | 112 |
vein | 1.21e-13 | 9 |
venous blood vessel | 1.21e-13 | 9 |
venous system | 1.21e-13 | 9 |
splanchnic layer of lateral plate mesoderm | 1.42e-12 | 83 |
lymphatic vessel | 3.07e-12 | 8 |
lymph vasculature | 3.07e-12 | 8 |
lymphatic part of lymphoid system | 3.07e-12 | 8 |
lateral plate mesoderm | 1.14e-09 | 203 |
epithelial tube | 1.18e-09 | 117 |
lymphoid system | 1.33e-09 | 10 |