FFCP PHASE1:Hg19::chr7:5111698..5111705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389458 | |EntrezGene=389458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_NR_015343_5end | |association_with_transcript=7bp_to_NR_015343_5end | ||
|cluster_id=chr7:5111698..5111705,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_LOC389458_5end | |description=CAGE_peak_3_at_LOC389458_5end | ||
|id=chr7:5111698..5111705,+ | |id=chr7:5111698..5111705,+ | ||
|ontology_enrichment_celltype=CL:0000306!7.70e-07!4;CL:0002222!7.70e-07!4;CL:0002224!7.70e-07!4 | |ontology_enrichment_celltype=CL:0000306!7.70e-07!4;CL:0002222!7.70e-07!4;CL:0002224!7.70e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease=DOID:8552!4.10e-23!1;DOID:5409!8.14e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002148!3.24e-12!2;UBERON:0009662!3.24e-12!2;UBERON:0000473!3.54e-12!8;UBERON:0003135!4.08e-09!11;UBERON:0000988!1.40e-08!3;UBERON:0006331!1.40e-08!3;UBERON:0010077!7.70e-07!4;UBERON:0005389!7.70e-07!4;UBERON:0000484!7.70e-07!4;UBERON:0002546!7.70e-07!4;UBERON:0000965!7.70e-07!4;UBERON:0001803!7.70e-07!4;UBERON:0003073!7.70e-07!4;UBERON:0005426!7.70e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0000076,1.80e-07,8 | |||
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|short_description=p3@LOC389458 | |short_description=p3@LOC389458 | ||
}} | }} |
Latest revision as of 23:17, 18 September 2015
Short description: | p3@LOC389458 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC389458_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 7bp_to_NR_015343_5end |
EntrezGene: | LOC389458 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
cuboidal epithelium | 1.29e-13 | 4 |
transparent eye structure | 1.29e-13 | 4 |
simple cuboidal epithelium | 1.29e-13 | 4 |
cranial placode | 1.29e-13 | 4 |
lens of camera-type eye | 1.29e-13 | 4 |
epithelium of lens | 1.29e-13 | 4 |
lens placode | 1.29e-13 | 4 |
lens vesicle | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
external ectoderm | 1.80e-07 | 8 |