FFCP PHASE1:Hg19::chr21:47588853..47588891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84221 | |EntrezGene=84221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1298 | |HGNC=1298 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0A9 | |UniProt=Q9H0A9 | ||
|association_with_transcript=-292bp_to_BC009497_5end | |||
|cluster_id=chr21:47588853..47588891,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_6_at_C21orf56_5end | |||
|id=chr21:47588853..47588891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2!CL:0000123;5.56e-26;2!CL:0000242;5.56e-26;2!CL:0000312;2.94e-11;5!CL:0000240;1.32e-09;6!CL:0000311;1.32e-09;6!CL:0000079;1.32e-09;6!CL:0000237;1.32e-09;6!CL:0000362;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2;CL:0000242,5.56e-26,2;CL:0000312,2.94e-11,5;CL:0000240,1.32e-09,6;CL:0000311,1.32e-09,6;CL:0000079,1.32e-09,6;CL:0000237,1.32e-09,6;CL:0000036,1.32e-09,6;CL:0000357,1.32e-09,6;CL:0000114,1.32e-09,6;CL:0000362,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.10e-26;2!CL:0000357;1.32e-09;6!CL:0000114;1.32e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.05e-41!41;UBERON:0001890!1.05e-41!41;UBERON:0006240!1.05e-41!41;UBERON:0003080!1.12e-40!42;UBERON:0001869!4.63e-40!32;UBERON:0001893!1.19e-37!34;UBERON:0002420!1.84e-33!9;UBERON:0007245!1.84e-33!9;UBERON:0010009!1.84e-33!9;UBERON:0010011!1.84e-33!9;UBERON:0000454!1.84e-33!9;UBERON:0002791!4.20e-33!33;UBERON:0002020!4.21e-32!34;UBERON:0003528!4.21e-32!34;UBERON:0009663!3.06e-30!7;UBERON:0001049!1.67e-29!57;UBERON:0005068!1.67e-29!57;UBERON:0006241!1.67e-29!57;UBERON:0007135!1.67e-29!57;UBERON:0002616!1.96e-28!59;UBERON:0003056!1.96e-27!61;UBERON:0000955!1.24e-23!69;UBERON:0006238!1.24e-23!69;UBERON:0002308!1.63e-23!9;UBERON:0000125!1.63e-23!9;UBERON:0001017!1.91e-22!82;UBERON:0005743!2.67e-21!86;UBERON:0000369!8.33e-20!4;UBERON:0002435!8.33e-20!4;UBERON:0000204!8.33e-20!4;UBERON:0010082!8.33e-20!4;UBERON:0000073!4.58e-19!94;UBERON:0001016!4.58e-19!94;UBERON:0003075!8.29e-19!86;UBERON:0007284!8.29e-19!86;UBERON:0001873!2.44e-18!2;UBERON:0010122!2.44e-18!2;UBERON:0001875!5.75e-18!2;UBERON:0006514!5.75e-18!2;UBERON:0002346!7.25e-18!90;UBERON:0002619!1.00e-16!22;UBERON:0007023!1.37e-15!115;UBERON:0000349!1.65e-15!5;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0001950!1.21e-13!20;UBERON:0005383!1.53e-12!3;UBERON:0005382!1.53e-12!3;UBERON:0000033!2.73e-12!123;UBERON:0000153!1.32e-11!129;UBERON:0007811!1.32e-11!129;UBERON:0004121!5.34e-11!169;UBERON:0000924!1.11e-10!173;UBERON:0006601!1.11e-10!173;UBERON:0001871!5.59e-10!7;UBERON:0001882!1.25e-09!1;UBERON:0005403!1.25e-09!1;UBERON:0002022!1.91e-09!1;UBERON:0002902!2.26e-09!1;UBERON:0009899!2.26e-09!1;UBERON:0007190!2.67e-09!1;UBERON:0000025!6.29e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0001873;8.10e-26;2!UBERON:0005383;1.03e-17;3!UBERON:0005382;1.03e-17;3!UBERON:0000369;1.21e-13;4!UBERON:0002435;1.21e-13;4!UBERON:0000204;1.21e-13;4!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0001871;2.26e-08;6!UBERON:0009663;2.26e-08;7!UBERON:0002791;1.25e-07;32!UBERON:0001869;1.25e-07;32!UBERON:0003528;3.81e-07;34!UBERON:0002020;3.81e-07;34!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0001873,7.14e-26,2;UBERON:0010122,7.14e-26,2;UBERON:0005383,9.46e-18,3;UBERON:0005382,9.46e-18,3;UBERON:0000369,1.13e-13,4;UBERON:0002435,1.13e-13,4;UBERON:0000204,1.13e-13,4;UBERON:0010082,1.13e-13,4;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0009663,2.18e-08,7;UBERON:0001871,2.35e-08,6;UBERON:0002791,5.04e-07,32;UBERON:0001869,5.04e-07,32;UBERON:0002420,8.37e-07,9;UBERON:0000125,8.37e-07,9;UBERON:0007245,8.37e-07,9;UBERON:0002308,8.37e-07,9;UBERON:0010009,8.37e-07,9;UBERON:0010011,8.37e-07,9;UBERON:0000454,8.37e-07,9 | |||
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|short_description=p6@C21orf56 | |||
}} | }} |
Latest revision as of 23:22, 18 September 2015
Short description: | p6@C21orf56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C21orf56_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -292bp_to_BC009497_5end |
EntrezGene: | C21orf56 |
HGNC: | 1298 |
UniProt: | Q9H0A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
Merkel cell | 5.56e-26 | 2 |
keratinocyte | 2.94e-11 | 5 |
stratified squamous epithelial cell | 1.32e-09 | 6 |
keratin accumulating cell | 1.32e-09 | 6 |
stratified epithelial cell | 1.32e-09 | 6 |
keratinizing barrier epithelial cell | 1.32e-09 | 6 |
epithelial fate stem cell | 1.32e-09 | 6 |
stratified epithelial stem cell | 1.32e-09 | 6 |
surface ectodermal cell | 1.32e-09 | 6 |
epidermal cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
caudate nucleus | 7.14e-26 | 2 |
future caudate nucleus | 7.14e-26 | 2 |
caudate-putamen | 9.46e-18 | 3 |
dorsal striatum | 9.46e-18 | 3 |
corpus striatum | 1.13e-13 | 4 |
striatum | 1.13e-13 | 4 |
ventral part of telencephalon | 1.13e-13 | 4 |
future corpus striatum | 1.13e-13 | 4 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
telencephalic nucleus | 2.18e-08 | 7 |
temporal lobe | 2.35e-08 | 6 |
regional part of telencephalon | 5.04e-07 | 32 |
cerebral hemisphere | 5.04e-07 | 32 |
basal ganglion | 8.37e-07 | 9 |
neural nucleus | 8.37e-07 | 9 |
nuclear complex of neuraxis | 8.37e-07 | 9 |
nucleus of brain | 8.37e-07 | 9 |
aggregate regional part of brain | 8.37e-07 | 9 |
collection of basal ganglia | 8.37e-07 | 9 |
cerebral subcortex | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |