FFCP PHASE1:Hg19::chr18:21032781..21032795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8780 | |EntrezGene=8780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11451 | |HGNC=11451 | ||
|TSSclassifier=strong | |||
|UniProt=O14730,B0YJ89 | |UniProt=O14730,B0YJ89 | ||
|association_with_transcript=0bp_to_ENST00000339486,NM_003831,uc002kui.3,uc010dls.2,uc010xas.1_5end | |||
|cluster_id=chr18:21032781..21032795,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_RIOK3_5end | |||
|id=chr18:21032781..21032795,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.85e-48!42;CL:0000860!5.63e-47!45;CL:0000766!6.20e-33!76;CL:0002194!1.43e-31!63;CL:0000576!1.43e-31!63;CL:0000040!1.43e-31!63;CL:0000559!1.43e-31!63;CL:0000839!1.30e-30!70;CL:0002009!2.90e-30!65;CL:0000557!5.08e-30!71;CL:0000763!1.38e-19!112;CL:0000049!1.38e-19!112;CL:0000738!5.76e-17!140;CL:0002087!1.64e-16!119;CL:0002031!3.06e-15!124;CL:0000037!3.06e-12!172;CL:0000566!3.06e-12!172;CL:0002032!1.00e-11!165;CL:0000837!1.00e-11!165;CL:0000988!6.75e-11!182;CL:0000767!5.71e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-13;33!CL:0002057;1.68e-13;33!CL:0000473;2.28e-09;39!CL:0000234;2.28e-09;39!CL:0000576;2.64e-08;48!CL:0000767;2.71e-07;3!CL:0000766;4.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.38e-15,42;CL:0002057,3.38e-15,42;CL:0000473,2.75e-13,48;CL:0000234,2.75e-13,48;CL:0000766,1.02e-11,72;CL:0002194,1.33e-10,59;CL:0000576,1.33e-10,59;CL:0000040,1.33e-10,59;CL:0000559,1.33e-10,59;CL:0002009,2.95e-10,61;CL:0000839,1.77e-09,66;CL:0000557,2.45e-09,67;CL:0000763,1.00e-07,108;CL:0000049,1.00e-07,108;CL:0000767,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-13;42!UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.93e-27!80;UBERON:0001474!2.01e-24!86;UBERON:0002390!1.16e-22!102;UBERON:0003061!1.16e-22!102;UBERON:0002193!1.52e-19!112;UBERON:0004765!4.33e-19!101;UBERON:0001434!4.33e-19!101;UBERON:0002405!2.08e-15!115;UBERON:0002204!2.17e-11!167;UBERON:0003081!3.82e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.52e-10,8;UBERON:0002371,3.18e-08,76;UBERON:0003135,1.20e-07,11;UBERON:0001474,1.29e-07,82;UBERON:0004765,6.33e-07,90 | |||
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| ||
|short_description=p5@RIOK3 | |||
}} | }} |
Latest revision as of 23:33, 18 September 2015
Short description: | p5@RIOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RIOK3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000339486, NM_003831, uc002kui.3, uc010dls.2, uc010xas.1_5end |
EntrezGene: | RIOK3 |
HGNC: | 11451 |
UniProt: | O14730B0YJ89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.38e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-15 | 42 |
defensive cell | 2.75e-13 | 48 |
phagocyte | 2.75e-13 | 48 |
myeloid leukocyte | 1.02e-11 | 72 |
monopoietic cell | 1.33e-10 | 59 |
monocyte | 1.33e-10 | 59 |
monoblast | 1.33e-10 | 59 |
promonocyte | 1.33e-10 | 59 |
macrophage dendritic cell progenitor | 2.95e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-09 | 66 |
granulocyte monocyte progenitor cell | 2.45e-09 | 67 |
myeloid cell | 1.00e-07 | 108 |
common myeloid progenitor | 1.00e-07 | 108 |
basophil | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.52e-10 | 8 |
bone marrow | 3.18e-08 | 76 |
male reproductive organ | 1.20e-07 | 11 |
bone element | 1.29e-07 | 82 |
skeletal element | 6.33e-07 | 90 |