FFCP PHASE1:Hg19::chr6:44106561..44106568,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:44106561..44106568,+
|short_description=p32@TMEM63B
|description=CAGE_peak_32_at_TMEM63B_5end
|association_with_transcript=11bp_to_ENST00000527188_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55362 | |EntrezGene=55362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17735 | |HGNC=17735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000527188_5end | |||
|cluster_id=chr6:44106561..44106568,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_32_at_TMEM63B_5end | |||
|id=chr6:44106561..44106568,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.43e-16!7;CL:0000586!1.43e-16!7;CL:0002127!9.73e-14!1;CL:0000914!9.73e-14!1;CL:0000911!9.73e-14!1;CL:0000814!9.73e-14!1;CL:0002042!9.73e-14!1;CL:0002039!9.73e-14!1;CL:0002040!9.73e-14!1;CL:0002041!9.73e-14!1;CL:0002322!7.14e-11!5;CL:0000893!1.64e-07!2;CL:0002489!1.64e-07!2;CL:0000809!1.64e-07!2;CL:0000808!1.64e-07!2;CL:0000894!1.64e-07!2;CL:0000806!1.64e-07!2;CL:0000807!1.64e-07!2;CL:0000805!1.64e-07!2;CL:0002425!1.64e-07!2;CL:0002535!2.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.42e-11;5!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.50e-45;10!UBERON:0005564;4.50e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!3.44e-14!22;DOID:2994!3.44e-14!22;DOID:3193!1.12e-07!2;DOID:962!1.12e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3193;8.10e-26;2!DOID:962;8.10e-26;2!DOID:1192;1.03e-17;3!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22!DOID:169;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,9.18e-26,2;DOID:962,9.18e-26,2;DOID:1192,1.12e-17,3;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.78e-39!8;UBERON:0003135!1.95e-28!11;UBERON:0000991!6.44e-15!21;UBERON:0009196!6.44e-15!21;UBERON:0009117!6.44e-15!21;UBERON:0005564!6.44e-15!21;UBERON:0004176!3.07e-14!22;UBERON:0003101!3.07e-14!22;UBERON:0000079!3.07e-14!22;UBERON:0003133!4.85e-09!48;UBERON:0003714!1.12e-07!2;UBERON:0001897!1.87e-07!2;UBERON:0006955!2.25e-07!2;UBERON:0004801!2.25e-07!2;UBERON:0005156!2.76e-07!59;UBERON:0000990!2.76e-07!59;UBERON:0003886!7.67e-07!63;UBERON:0002323!9.13e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.02e-56;8!UBERON:0003135;4.36e-41;11!UBERON:0003714;8.10e-26;2!UBERON:0000991;4.59e-22;21!UBERON:0003101;4.13e-21;22!UBERON:0000079;4.13e-21;22!UBERON:0000013;3.42e-11;5!UBERON:0002410;3.42e-11;5!UBERON:0002323;3.94e-09;45!UBERON:0003133;9.04e-09;44!UBERON:0002553;7.84e-07;52!UBERON:0000010;8.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.57e-56,8;UBERON:0003135,4.07e-41,11;UBERON:0003714,9.18e-26,2;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003101,3.99e-21,22;UBERON:0000079,3.99e-21,22;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0002323,1.31e-10,46;UBERON:0003133,3.32e-10,48;UBERON:0004458,5.14e-10,49;UBERON:0003886,3.61e-09,54;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59;UBERON:0002553,3.25e-08,61;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p32@TMEM63B | |||
}} | }} |
Latest revision as of 23:37, 18 September 2015
Short description: | p32@TMEM63B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_TMEM63B_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 11bp_to_ENST00000527188_5end |
EntrezGene: | TMEM63B |
HGNC: | 17735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.57e-56 | 8 |
male reproductive organ | 4.07e-41 | 11 |
neural tissue | 9.18e-26 | 2 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male organism | 3.99e-21 | 22 |
male reproductive system | 3.99e-21 | 22 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
body cavity | 1.31e-10 | 46 |
reproductive organ | 3.32e-10 | 48 |
body cavity or lining | 5.14e-10 | 49 |
body cavity precursor | 3.61e-09 | 54 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 9.18e-26 | 2 |
neurofibroma | 9.18e-26 | 2 |
peripheral nervous system neoplasm | 1.12e-17 | 3 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |
neuroendocrine tumor | 1.57e-09 | 6 |