FFCP PHASE1:Hg19::chr10:70715944..70715955,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:70715944..70715955,+
|short_description=p2@DDX21
|description=CAGE_peak_2_at_DDX21_5end
|association_with_transcript=15bp_to_ENST00000541642_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9188 | |EntrezGene=9188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2744 | |HGNC=2744 | ||
|TSSclassifier=strong | |||
|UniProt=Q3SWU7 | |UniProt=Q3SWU7 | ||
|association_with_transcript=15bp_to_ENST00000541642_5end | |||
|cluster_id=chr10:70715944..70715955,+ | |||
|description=CAGE_peak_2_at_DDX21_5end | |||
|id=chr10:70715944..70715955,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.38e-23!172;CL:0000566!2.38e-23!172;CL:0002032!7.73e-22!165;CL:0000837!7.73e-22!165;CL:0000988!1.07e-21!182;CL:0000763!7.44e-17!112;CL:0000049!7.44e-17!112;CL:0000738!1.24e-16!140;CL:0000063!7.85e-16!578;CL:0000860!1.38e-15!45;CL:0002057!7.02e-15!42;CL:0000012!1.64e-14!682;CL:0000548!6.09e-14!679;CL:0000004!6.09e-14!679;CL:0000255!6.09e-14!679;CL:0002031!5.11e-13!124;CL:0002087!5.27e-13!119;CL:0000766!4.42e-11!76;CL:0000003!8.29e-10!722;CL:0000557!2.81e-09!71;CL:0002009!1.23e-08!65;CL:0000839!3.43e-08!70;CL:0002194!7.40e-08!63;CL:0000576!7.40e-08!63;CL:0000040!7.40e-08!63;CL:0000559!7.40e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.61e-12;33!CL:0002057;4.61e-12;33!CL:0000576;6.69e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.25e-22,168;CL:0000988,2.27e-21,177;CL:0002032,3.92e-21,161;CL:0000837,3.92e-21,161;CL:0000763,3.26e-16,108;CL:0000049,3.26e-16,108;CL:0000738,5.54e-16,136;CL:0000860,6.99e-15,42;CL:0002057,6.99e-15,42;CL:0002031,2.07e-12,120;CL:0002087,2.14e-12,115;CL:0000766,1.72e-10,72;CL:0000473,5.22e-10,48;CL:0000234,5.22e-10,48;CL:0000557,1.05e-08,67;CL:0002009,4.55e-08,61;CL:0000839,1.24e-07,66;CL:0002194,2.68e-07,59;CL:0000576,2.68e-07,59;CL:0000040,2.68e-07,59;CL:0000559,2.68e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-11;42 | |||
|ontology_enrichment_disease=DOID:162!4.14e-30!235;DOID:14566!2.08e-29!239;DOID:0050687!6.21e-17!143;DOID:305!1.84e-14!106;DOID:0050686!4.14e-14!137;DOID:2531!3.23e-11!51;DOID:0060083!3.23e-11!51;DOID:1240!4.34e-09!39;DOID:8692!3.40e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.29e-07;39!DOID:2531;2.11e-07;51!DOID:0060083;2.11e-07;51!DOID:8692;6.85e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.15e-30,235;DOID:14566,2.08e-29,239;DOID:0050687,6.26e-17,143;DOID:305,1.86e-14,106;DOID:0050686,4.17e-14,137;DOID:2531,3.22e-11,51;DOID:0060083,3.22e-11,51;DOID:1240,4.32e-09,39;DOID:8692,3.39e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.00e-07!86;UBERON:0002371!3.41e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.47e-07,82 | |||
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| ||
|short_description=p2@DDX21 | |||
}} | }} |
Latest revision as of 23:44, 18 September 2015
Short description: | p2@DDX21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX21_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000541642_5end |
EntrezGene: | DDX21 |
HGNC: | 2744 |
UniProt: | Q3SWU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.25e-22 | 168 |
hematopoietic cell | 2.27e-21 | 177 |
hematopoietic oligopotent progenitor cell | 3.92e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.92e-21 | 161 |
myeloid cell | 3.26e-16 | 108 |
common myeloid progenitor | 3.26e-16 | 108 |
leukocyte | 5.54e-16 | 136 |
classical monocyte | 6.99e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.99e-15 | 42 |
hematopoietic lineage restricted progenitor cell | 2.07e-12 | 120 |
nongranular leukocyte | 2.14e-12 | 115 |
myeloid leukocyte | 1.72e-10 | 72 |
defensive cell | 5.22e-10 | 48 |
phagocyte | 5.22e-10 | 48 |
granulocyte monocyte progenitor cell | 1.05e-08 | 67 |
macrophage dendritic cell progenitor | 4.55e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.24e-07 | 66 |
monopoietic cell | 2.68e-07 | 59 |
monocyte | 2.68e-07 | 59 |
monoblast | 2.68e-07 | 59 |
promonocyte | 2.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.47e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.15e-30 | 235 |
disease of cellular proliferation | 2.08e-29 | 239 |
cell type cancer | 6.26e-17 | 143 |
carcinoma | 1.86e-14 | 106 |
organ system cancer | 4.17e-14 | 137 |
hematologic cancer | 3.22e-11 | 51 |
immune system cancer | 3.22e-11 | 51 |
leukemia | 4.32e-09 | 39 |
myeloid leukemia | 3.39e-07 | 31 |