FFCP PHASE1:Hg19::chr7:5447185..5447197,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84629 | |EntrezGene=84629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11962 | |HGNC=11962 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9K1 | |UniProt=C9J9K1 | ||
|association_with_transcript=-160bp_to_ENST00000434361_5end | |association_with_transcript=-160bp_to_ENST00000434361_5end | ||
|cluster_id=chr7:5447185..5447197,- | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_23_at_TNRC18_5end | |description=CAGE_peak_23_at_TNRC18_5end | ||
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|ontology_enrichment_celltype=CL:0002322!1.90e-52!5;CL:0000039!4.80e-25!7;CL:0000586!4.80e-25!7;CL:0000540!2.22e-16!6;CL:0000031!2.22e-16!6;CL:0000404!2.22e-16!6;CL:0000047!1.96e-12!8;CL:0000148!5.28e-10!10;CL:0000541!5.28e-10!10;CL:0000147!2.74e-07!14 | |ontology_enrichment_celltype=CL:0002322!1.90e-52!5;CL:0000039!4.80e-25!7;CL:0000586!4.80e-25!7;CL:0000540!2.22e-16!6;CL:0000031!2.22e-16!6;CL:0000404!2.22e-16!6;CL:0000047!1.96e-12!8;CL:0000148!5.28e-10!10;CL:0000541!5.28e-10!10;CL:0000147!2.74e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.52e-90;7!CL:0000586;3.52e-90;7!CL:0002322;3.49e-09;5 | |ontology_enrichment_celltype_v019=CL:0000039;3.52e-90;7!CL:0000586;3.52e-90;7!CL:0002322;3.49e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.52e-90,7;CL:0000586,3.52e-90,7;CL:0002322,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.84e-63;10!UBERON:0005564;1.84e-63;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.84e-63;10!UBERON:0005564;1.84e-63;10 | ||
|ontology_enrichment_disease=DOID:3095!5.59e-17!22;DOID:2994!5.59e-17!22 | |ontology_enrichment_disease=DOID:3095!5.59e-17!22;DOID:2994!5.59e-17!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.19e-29;22!DOID:2994;2.19e-29;22 | |ontology_enrichment_disease_v019=DOID:3095;2.19e-29;22!DOID:2994;2.19e-29;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.19e-29,22;DOID:2994,2.19e-29,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.89e-22!8;UBERON:0003135!4.78e-16!11;UBERON:0000991!1.69e-08!21;UBERON:0009196!1.69e-08!21;UBERON:0009117!1.69e-08!21;UBERON:0005564!1.69e-08!21;UBERON:0004176!4.05e-08!22;UBERON:0003101!4.05e-08!22;UBERON:0000079!4.05e-08!22 | |ontology_enrichment_uberon=UBERON:0000473!5.89e-22!8;UBERON:0003135!4.78e-16!11;UBERON:0000991!1.69e-08!21;UBERON:0009196!1.69e-08!21;UBERON:0009117!1.69e-08!21;UBERON:0005564!1.69e-08!21;UBERON:0004176!4.05e-08!22;UBERON:0003101!4.05e-08!22;UBERON:0000079!4.05e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.74e-79;8!UBERON:0003135;8.62e-58;11!UBERON:0000991;9.67e-31;21!UBERON:0003101;2.19e-29;22!UBERON:0000079;2.19e-29;22!UBERON:0002323;9.15e-14;45!UBERON:0000922;1.22e-13;49!UBERON:0003133;2.58e-11;44!UBERON:0002553;5.33e-09;52!UBERON:0004458;7.80e-08;48!UBERON:0005156;2.01e-07;59!UBERON:0000990;2.01e-07;59 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.74e-79;8!UBERON:0003135;8.62e-58;11!UBERON:0000991;9.67e-31;21!UBERON:0003101;2.19e-29;22!UBERON:0000079;2.19e-29;22!UBERON:0002323;9.15e-14;45!UBERON:0000922;1.22e-13;49!UBERON:0003133;2.58e-11;44!UBERON:0002553;5.33e-09;52!UBERON:0004458;7.80e-08;48!UBERON:0005156;2.01e-07;59!UBERON:0000990;2.01e-07;59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.74e-79,8;UBERON:0003135,8.62e-58,11;UBERON:0000991,9.67e-31,21;UBERON:0009196,9.67e-31,21;UBERON:0009117,9.67e-31,21;UBERON:0005564,9.67e-31,21;UBERON:0004176,2.19e-29,22;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0002323,1.76e-14,46;UBERON:0003133,6.59e-14,48;UBERON:0004458,1.22e-13,49;UBERON:0003886,1.93e-12,54;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0002553,4.30e-11,61 | |||
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|short_description=p23@TNRC18 | |short_description=p23@TNRC18 | ||
}} | }} |
Latest revision as of 23:52, 18 September 2015
Short description: | p23@TNRC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TNRC18_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -160bp_to_ENST00000434361_5end |
EntrezGene: | TNRC18 |
HGNC: | 11962 |
UniProt: | C9J9K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.52e-90 | 7 |
germ cell | 3.52e-90 | 7 |
embryonic stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 4.74e-79 | 8 |
male reproductive organ | 8.62e-58 | 11 |
gonad | 9.67e-31 | 21 |
indifferent external genitalia | 9.67e-31 | 21 |
indifferent gonad | 9.67e-31 | 21 |
gonad primordium | 9.67e-31 | 21 |
external genitalia | 2.19e-29 | 22 |
male organism | 2.19e-29 | 22 |
male reproductive system | 2.19e-29 | 22 |
body cavity | 1.76e-14 | 46 |
reproductive organ | 6.59e-14 | 48 |
body cavity or lining | 1.22e-13 | 49 |
body cavity precursor | 1.93e-12 | 54 |
reproductive structure | 1.91e-11 | 59 |
reproductive system | 1.91e-11 | 59 |
anatomical cavity | 4.30e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.19e-29 | 22 |
germ cell cancer | 2.19e-29 | 22 |