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FFCP PHASE1:Hg19::chr10:70847352..70847365,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=5552
|EntrezGene=5552
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=9361
|HGNC=9361
|TSSclassifier=strong
|UniProt=P10124
|UniProt=P10124
|association_with_transcript=-462bp_to_NM_002727,NR_036430,uc001joz.2_5end
|association_with_transcript=-462bp_to_NM_002727,NR_036430,uc001joz.2_5end
|cluster_id=chr10:70847352..70847365,+
|coexpression_cluster_id=C2
|coexpression_cluster_id=C2
|description=CAGE_peak_6_at_SRGN_5end
|description=CAGE_peak_6_at_SRGN_5end
|id=chr10:70847352..70847365,+
|id=chr10:70847352..70847365,+
|ontology_enrichment_celltype=CL:0000037!1.31e-62!172;CL:0000566!1.31e-62!172;CL:0000988!1.15e-58!182;CL:0002032!2.79e-58!165;CL:0000837!2.79e-58!165;CL:0000738!1.03e-57!140;CL:0000763!1.77e-55!112;CL:0000049!1.77e-55!112;CL:0000766!5.84e-52!76;CL:0002031!3.76e-44!124;CL:0000557!5.28e-44!71;CL:0000839!6.26e-43!70;CL:0002087!4.43e-42!119;CL:0002009!3.78e-41!65;CL:0002194!1.17e-39!63;CL:0000576!1.17e-39!63;CL:0000040!1.17e-39!63;CL:0000559!1.17e-39!63;CL:0002057!1.74e-36!42;CL:0000860!7.50e-33!45;CL:0000134!2.85e-20!358;CL:0002320!4.98e-19!365;CL:0000219!1.57e-15!390;CL:0000048!9.60e-13!430;CL:0000034!1.80e-12!444;CL:0000723!5.38e-12!436;CL:0000094!9.77e-10!8;CL:0000990!1.35e-07!8;CL:0000451!3.14e-07!10
|ontology_enrichment_celltype=CL:0000037!1.31e-62!172;CL:0000566!1.31e-62!172;CL:0000988!1.15e-58!182;CL:0002032!2.79e-58!165;CL:0000837!2.79e-58!165;CL:0000738!1.03e-57!140;CL:0000763!1.77e-55!112;CL:0000049!1.77e-55!112;CL:0000766!5.84e-52!76;CL:0002031!3.76e-44!124;CL:0000557!5.28e-44!71;CL:0000839!6.26e-43!70;CL:0002087!4.43e-42!119;CL:0002009!3.78e-41!65;CL:0002194!1.17e-39!63;CL:0000576!1.17e-39!63;CL:0000040!1.17e-39!63;CL:0000559!1.17e-39!63;CL:0002057!1.74e-36!42;CL:0000860!7.50e-33!45;CL:0000134!2.85e-20!358;CL:0002320!4.98e-19!365;CL:0000219!1.57e-15!390;CL:0000048!9.60e-13!430;CL:0000034!1.80e-12!444;CL:0000723!5.38e-12!436;CL:0000094!9.77e-10!8;CL:0000990!1.35e-07!8;CL:0000451!3.14e-07!10
|ontology_enrichment_celltype_v019=CL:0000860;2.20e-68;33!CL:0002057;2.20e-68;33!CL:0000473;6.95e-50;39!CL:0000234;6.95e-50;39!CL:0000576;6.79e-45;48!CL:0000766;7.43e-36;69!CL:0000094;2.93e-20;8!CL:0000763;6.77e-20;100!CL:0000081;2.81e-14;11!CL:0000738;3.52e-13;136!CL:0002087;4.35e-13;104!CL:0000775;2.70e-09;3!CL:0000988;9.83e-09;177!CL:0000767;1.06e-07;3!CL:0000226;2.36e-07;3!CL:0000842;2.36e-07;3!CL:0002393;9.13e-07;6!CL:0002397;9.13e-07;6
|ontology_enrichment_celltype_v019_2=CL:0000766,1.87e-90,72;CL:0000860,4.96e-73,42;CL:0002057,4.96e-73,42;CL:0000839,1.95e-69,66;CL:0002194,3.18e-69,59;CL:0000576,3.18e-69,59;CL:0000040,3.18e-69,59;CL:0000559,3.18e-69,59;CL:0000557,3.24e-68,67;CL:0000763,3.48e-67,108;CL:0000049,3.48e-67,108;CL:0002009,1.43e-66,61;CL:0000473,7.09e-66,48;CL:0000234,7.09e-66,48;CL:0000738,5.21e-56,136;CL:0000037,1.58e-52,168;CL:0000988,5.39e-49,177;CL:0002032,3.52e-48,161;CL:0000837,3.52e-48,161;CL:0002087,1.87e-43,115;CL:0002031,7.06e-41,120;CL:0000094,2.30e-20,8;CL:0000134,5.09e-16,354;CL:0002320,2.19e-15,361;CL:0000081,2.37e-14,11;CL:0000219,3.70e-13,386;CL:0000034,2.27e-11,441;CL:0000048,4.63e-11,427;CL:0000723,1.12e-10,433;CL:0000775,2.71e-09,3;CL:0000767,8.37e-08,3;CL:0000226,2.39e-07,3;CL:0000842,2.39e-07,3
|ontology_enrichment_development_v019=CL:0002057;6.34e-53;42!CL:0000049;5.13e-17;108
|ontology_enrichment_disease=DOID:8692!6.84e-07!31
|ontology_enrichment_disease=DOID:8692!6.84e-07!31
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!2.62e-53!102;UBERON:0003061!2.62e-53!102;UBERON:0002193!3.98e-49!112;UBERON:0002371!7.43e-42!80;UBERON:0001474!4.26e-37!86;UBERON:0002405!2.62e-29!115;UBERON:0004765!8.49e-28!101;UBERON:0001434!8.49e-28!101;UBERON:0002384!8.34e-18!375;UBERON:0003081!8.67e-15!216;UBERON:0002204!3.71e-11!167;UBERON:0000178!9.17e-11!15;UBERON:0000179!9.17e-11!15;UBERON:0000463!9.17e-11!15
|ontology_enrichment_uberon=UBERON:0002390!2.62e-53!102;UBERON:0003061!2.62e-53!102;UBERON:0002193!3.98e-49!112;UBERON:0002371!7.43e-42!80;UBERON:0001474!4.26e-37!86;UBERON:0002405!2.62e-29!115;UBERON:0004765!8.49e-28!101;UBERON:0001434!8.49e-28!101;UBERON:0002384!8.34e-18!375;UBERON:0003081!8.67e-15!216;UBERON:0002204!3.71e-11!167;UBERON:0000178!9.17e-11!15;UBERON:0000179!9.17e-11!15;UBERON:0000463!9.17e-11!15
|ontology_enrichment_uberon_v019=UBERON:0000178;8.86e-22;15!UBERON:0000179;8.86e-22;15!UBERON:0000463;8.86e-22;15!UBERON:0002390;3.57e-11;32
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.06e-78,98;UBERON:0003061,1.06e-78,98;UBERON:0002193,5.59e-70,108;UBERON:0002371,2.36e-61,76;UBERON:0001474,6.36e-56,82;UBERON:0002405,4.57e-50,93;UBERON:0004765,8.44e-50,90;UBERON:0001434,1.61e-43,100;UBERON:0003081,4.07e-31,203;UBERON:0002204,5.37e-22,167;UBERON:0000178,8.51e-22,15;UBERON:0000179,8.51e-22,15;UBERON:0000463,8.51e-22,15;UBERON:0002384,1.60e-14,371;UBERON:0000926,1.77e-14,315;UBERON:0004120,1.77e-14,315;UBERON:0006603,1.77e-14,315
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|short_description=p6@SRGN
|short_description=p6@SRGN
}}
}}

Latest revision as of 00:16, 19 September 2015

Short description:p6@SRGN
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_SRGN_5end
Coexpression cluster:C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast
Association with transcript: -462bp_to_NM_002727, NR_036430, uc001joz.2_5end
EntrezGene:SRGN
HGNC: 9361
UniProt: P10124
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data