FFCP PHASE1:Hg19::chr3:52568011..52568039,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37257 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000491607_5end | |||
|cluster_id=chr3:52568011..52568039,+ | |||
|description=CAGE_peak_5_at_C3orf78_5end | |||
|id=chr3:52568011..52568039,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-25!180;CL:0000057!7.97e-11!75;CL:0000133!3.68e-10!59;CL:0000183!4.83e-09!59;CL:0000393!4.43e-08!60;CL:0000211!4.43e-08!60;CL:0000680!6.96e-08!57;CL:0000056!6.96e-08!57;CL:0000355!6.96e-08!57;CL:0000333!1.06e-07!41;CL:0000187!2.00e-07!54;CL:0002321!5.35e-07!248;CL:0000220!7.31e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.02e-10,59;CL:0000057,9.07e-10,76;CL:0000221,3.80e-07,72;CL:0000333,8.03e-07,41;CL:0002319,9.26e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.10e-17!365;UBERON:0000483!1.97e-13!309;UBERON:0000119!2.78e-13!312;UBERON:0000481!7.53e-13!347;UBERON:0002100!8.27e-10!216;UBERON:0000468!1.12e-09!659;UBERON:0005256!1.18e-09!143;UBERON:0000477!4.92e-09!286;UBERON:0000914!1.13e-08!83;UBERON:0002329!1.13e-08!83;UBERON:0003077!1.13e-08!83;UBERON:0003059!1.13e-08!83;UBERON:0007282!1.13e-08!83;UBERON:0009618!1.13e-08!83;UBERON:0007285!1.13e-08!83;UBERON:0004290!2.08e-08!70;UBERON:0004111!2.75e-08!241;UBERON:0000486!1.35e-07!82;UBERON:0002385!4.79e-07!63;UBERON:0001015!4.79e-07!63;UBERON:0000383!4.79e-07!63;UBERON:0001134!5.00e-07!61;UBERON:0002036!5.00e-07!61;UBERON:0003082!5.00e-07!61;UBERON:0004121!5.81e-07!169;UBERON:0000924!9.20e-07!173;UBERON:0006601!9.20e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.52e-09,160;UBERON:0009142,6.52e-09,160;UBERON:0000483,4.04e-08,306;UBERON:0007503,6.15e-08,78;UBERON:0000119,1.08e-07,309;UBERON:0005256,2.11e-07,122;UBERON:0007524,7.02e-07,73;UBERON:0002329,9.47e-07,71;UBERON:0003059,9.47e-07,71;UBERON:0007282,9.47e-07,71;UBERON:0004290,9.47e-07,71;UBERON:0009618,9.47e-07,71 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.563817616383885,4.00293193412522,1.78784437770915,2.61701557230111,0,1.26343974685366,3.13422753839806,0.737201809504527,1.39560233594486,0.655324116390517,2.37390280405608,1.8564952944007,3.31397375727916,2.6893005858071,3.01347264011988,5.84248072309899,2.92759679274304,2.09305798730539,5.30401797235058,5.64218498660558,2.86235987131057,3.14811177667634,2.13422487311165,0,0.410502947249729,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,1.85921281392724,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,1.10540007114339,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.15076305659177,3.97583067623023,4.01070328508712,2.60723734129483,2.3858578411533,4.86634870302636,2.45790524626576,2.21729397462564,3.07421749925941,0.785874452986276,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.69592382577203,0.419499436209906,0.275118041940067,0.417989933073621,1.03366703667732,1.06729878806013,0.33472061276467,1.20848795132744,3.04108842287405,1.95249646038536,0,5.67099363517232,1.16089646769304,1.12264686313085,0.900891843866578,0,0.949265659568129,1.09921046358244,0,0,0,5.4666914686485,0.379891534993739,1.45650098894541,1.43418310374407,1.41867352879343,1.12135520028461,3.20246987189115,3.20667812942308,1.8672662123986,1.75123873690594,1.14423332179421,1.96764655938411,5.76175924479999,1.40592859100278,1.24864030732128,0.570471821544449,2.09228152772521,1.87895197830024,0.971237666208789,1.26405726032024,1.42907919878425,2.21101771161182,2.27316718586684,5.94001428641027,3.21447008062124,0.910161361938026,5.03032699271367,1.17835279767846,1.50142223846357,0.554128230968366,1.75591048352335,2.45190236639216,2.70428506031874,0.567160915800105,0.538168907066586,1.49490172172997,1.27159140695737,2.10063767259082,1.23663035086127,1.03056216018252,1.8611685633159,0.843881661206331,1.07180705677318,2.01947019395292,2.30124746605748,2.58633690910099,1.06502877754984,0.705264687593482,0.67824236924195,0,0.272746120590835,1.43402297694502,0.853815942907168,1.59035721985782,0.929551542956147,1.34759371519982,0.756962552626885,3.28479623168247,1.56449532329816,5.78916844373597,2.76269842704961,3.25057549622385,2.16563844500876,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,2.21446636387394,0,1.6462960453256,4.41026134156626,0,0,1.18157981336281,0,1.35287282397425,1.20097467208968,0.439001141634502,0,0.100528972411631,0.185176890317059,0.651616610620649,3.11980435583874,5.77325368101093,1.507095264676,1.17408694235822,1.73239737313289,1.85194205030644,0.951270761172991,1.58040879591855,0.858486162094873,0,0,0.445893486866185,0,0,0,0.358234090811393,0,0.383382679165211,0.492663237895943,0.264145302039678,0,0.144119953416961,0.37872730027914,0.952468414382536,2.29193055334967,3.51652341630141,0,0.925447434329912,3.30377363628309,2.28661146104463,0.336393253036082,0.87192013766656,0.5867062865676,1.68053230485111,10.7296933755565,1.690605505112,0,0,2.31486636835928,0,1.3321108950805,0.857867961948885,9.22456729165453,1.64648067356154,0,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,0.499864955910285,0,0.502257091432126,0,0.479249710983165,1.14861935834114,5.70547620162874,1.44781306667579,2.4657158706046,1.07436577943937,0.784596007954691,0,0,0,1.77866236955724,2.60279707715243,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,1.47229790062968,6.5022167737758,2.98391526069709,6.03115498439341,6.95873056308931,3.46945313074656,6.55991923959194,2.10662269809403,4.5481500811197,8.27784570340039,0,0.553107505625109,0.868836144680828,3.72022199179207,6.51972505240626,0,0,0,0.909382714338778,3.32870879020994,3.32629322662648,2.72918588600655,1.84154367945675,1.68396056659844,0.640695746278505,1.53512174720011,0.804269605718038,0,1.69630663182921,2.84098760501003,1.06765302817952,1.03850885836724,1.85936605535935,0.725156697549733,0.802025881213139,0.552485933615378,0.68888668898764,1.0925470080403,2.09799063935079,0.902399225814824,0.308061348417659,2.35304930753057,0,0.949964660035881,0,2.2112181685947,1.29549549661284,6.16909010761157,1.62567862526312,2.50844886927427,0.509752546090077,0.831076008928724,2.46262230194396,0,0,0.769350375349168,1.96808787419823,1.95227036798582,0.618246069886334,0.457847324091717,0.330037999682352,0,0.650060246036521,0,0.870036464629098,1.54048617114644,2.76306614507033,0.689182862422653,2.0409846524972,4.93056759308377,2.13066568540252,1.51354460599453,0.330569830721956,0.768760269460425,1.02090169995667,0.30347334256665,3.25391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| |||
|short_description=p5@C3orf78 | |||
}} |
Latest revision as of 00:19, 19 September 2015
Short description: | p5@C3orf78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C3orf78_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491607_5end |
EntrezGene: | C3orf78 |
HGNC: | 37257 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.02e-10 | 59 |
fibroblast | 9.07e-10 | 76 |
ectodermal cell | 3.80e-07 | 72 |
migratory neural crest cell | 8.03e-07 | 41 |
neural cell | 9.26e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.52e-09 | 160 |
entire embryonic mesenchyme | 6.52e-09 | 160 |
epithelium | 4.04e-08 | 306 |
epithelial vesicle | 6.15e-08 | 78 |
cell layer | 1.08e-07 | 309 |
trunk mesenchyme | 2.11e-07 | 122 |
dense mesenchyme tissue | 7.02e-07 | 73 |
somite | 9.47e-07 | 71 |
presomitic mesoderm | 9.47e-07 | 71 |
presumptive segmental plate | 9.47e-07 | 71 |
dermomyotome | 9.47e-07 | 71 |
trunk paraxial mesoderm | 9.47e-07 | 71 |