FFCP PHASE1:Hg19::chr8:71520450..71520484,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:71520450..71520484,-
|short_description=p3@TRAM1
|description=CAGE_peak_3_at_TRAM1_5end
|association_with_transcript=89bp_to_ENST00000521049_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23471 | |EntrezGene=23471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20568 | |HGNC=20568 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000521049_5end | |||
|cluster_id=chr8:71520450..71520484,- | |||
|coexpression_cluster_id=C4769 | |||
|description=CAGE_peak_3_at_TRAM1_5end | |||
|id=chr8:71520450..71520484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.43e-14!155;UBERON:0001555!1.43e-14!155;UBERON:0007026!1.43e-14!155;UBERON:0004119!4.26e-14!169;UBERON:0000925!4.26e-14!169;UBERON:0006595!4.26e-14!169;UBERON:0003929!6.51e-11!54;UBERON:0004921!2.56e-10!129;UBERON:0004185!2.56e-10!129;UBERON:0000077!9.25e-09!130;UBERON:0005911!1.72e-08!82;UBERON:0000161!2.16e-08!35;UBERON:0002530!6.47e-08!59;UBERON:0003102!5.94e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.68e-13,145;UBERON:0001555,4.68e-13,145;UBERON:0007026,4.68e-13,145;UBERON:0004119,9.07e-13,160;UBERON:0000925,9.07e-13,160;UBERON:0006595,9.07e-13,160;UBERON:0003929,6.40e-11,54;UBERON:0000161,8.70e-09,36;UBERON:0004921,1.14e-08,118;UBERON:0005911,1.70e-08,82;UBERON:0002530,6.38e-08,59;UBERON:0003102,2.09e-07,99 | |||
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| ||
|short_description=p3@TRAM1 | |||
}} | }} |
Latest revision as of 00:28, 19 September 2015
Short description: | p3@TRAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAM1_5end |
Coexpression cluster: | C4769_Nucleus_normal_Urothelial_Prostate_Mesenchymal_lung_Fibroblast |
Association with transcript: | 89bp_to_ENST00000521049_5end |
EntrezGene: | TRAM1 |
HGNC: | 20568 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 4.68e-13 | 145 |
digestive tract | 4.68e-13 | 145 |
primitive gut | 4.68e-13 | 145 |
endoderm-derived structure | 9.07e-13 | 160 |
endoderm | 9.07e-13 | 160 |
presumptive endoderm | 9.07e-13 | 160 |
gut epithelium | 6.40e-11 | 54 |
orifice | 8.70e-09 | 36 |
subdivision of digestive tract | 1.14e-08 | 118 |
endo-epithelium | 1.70e-08 | 82 |
gland | 6.38e-08 | 59 |
surface structure | 2.09e-07 | 99 |