FFCP PHASE1:Hg19::chr8:72273998..72274010,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:72273998..72274010,-
|short_description=p7@EYA1
|description=CAGE_peak_7_at_EYA1_5end
|association_with_transcript=-32bp_to_ENST00000465115_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2138 | |EntrezGene=2138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3519 | |HGNC=3519 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIQ7 | |UniProt=E5RIQ7 | ||
|association_with_transcript=-32bp_to_ENST00000465115_5end | |||
|cluster_id=chr8:72273998..72274010,- | |||
|description=CAGE_peak_7_at_EYA1_5end | |||
|id=chr8:72273998..72274010,- | |||
|ontology_enrichment_celltype=CL:0002552!8.77e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.25e-14;5!CL:0002549;1.33e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.36e-18;1!UBERON:0004140;7.36e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.23e-15;10!DOID:169;3.85e-12;6!DOID:3095;1.98e-07;22!DOID:2994;1.98e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.56e-16,10;DOID:169,3.08e-12,6;DOID:3095,1.77e-07,22;DOID:2994,1.77e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002616!5.12e-25!59;UBERON:0000955!9.22e-24!69;UBERON:0006238!9.22e-24!69;UBERON:0000073!7.96e-23!94;UBERON:0001016!7.96e-23!94;UBERON:0001049!1.05e-22!57;UBERON:0005068!1.05e-22!57;UBERON:0006241!1.05e-22!57;UBERON:0007135!1.05e-22!57;UBERON:0002780!2.28e-22!41;UBERON:0001890!2.28e-22!41;UBERON:0006240!2.28e-22!41;UBERON:0001017!7.30e-22!82;UBERON:0003080!1.28e-21!42;UBERON:0005743!1.58e-21!86;UBERON:0002346!7.85e-21!90;UBERON:0001893!2.72e-20!34;UBERON:0000924!3.29e-20!173;UBERON:0006601!3.29e-20!173;UBERON:0002020!3.47e-20!34;UBERON:0003528!3.47e-20!34;UBERON:0000153!7.79e-20!129;UBERON:0007811!7.79e-20!129;UBERON:0002791!4.20e-19!33;UBERON:0000033!7.09e-19!123;UBERON:0003075!1.66e-18!86;UBERON:0007284!1.66e-18!86;UBERON:0001869!1.70e-18!32;UBERON:0004121!3.05e-18!169;UBERON:0007023!3.29e-18!115;UBERON:0003056!1.64e-15!61;UBERON:0002420!2.75e-12!9;UBERON:0007245!2.75e-12!9;UBERON:0010009!2.75e-12!9;UBERON:0010011!2.75e-12!9;UBERON:0000454!2.75e-12!9;UBERON:0002619!6.61e-12!22;UBERON:0002308!1.07e-11!9;UBERON:0000125!1.07e-11!9;UBERON:0001950!1.72e-11!20;UBERON:0000956!2.75e-11!25;UBERON:0000203!2.75e-11!25;UBERON:0000475!4.06e-11!365;UBERON:0009663!8.48e-10!7;UBERON:0001871!5.55e-09!7;UBERON:0000477!6.03e-09!286;UBERON:0000481!1.10e-08!347;UBERON:0000119!2.84e-08!312;UBERON:0000922!3.85e-08!612;UBERON:0000483!1.34e-07!309;UBERON:0000923!5.59e-07!604;UBERON:0005291!5.59e-07!604;UBERON:0006598!5.59e-07!604;UBERON:0002532!5.59e-07!604;UBERON:0002050!6.44e-07!605;UBERON:0005423!6.44e-07!605;UBERON:0000200!6.81e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;7.36e-18;1!UBERON:0000013;2.25e-14;5!UBERON:0002410;2.25e-14;5!UBERON:0001876;1.33e-09;2!UBERON:0000007;1.33e-09;2!UBERON:0002360;1.33e-09;2!UBERON:0005629;1.33e-09;2!UBERON:0000094;1.33e-09;2!UBERON:0005358;1.33e-09;2!UBERON:0001886;1.33e-09;2!UBERON:0004086;1.33e-09;2!UBERON:0010743;1.33e-09;2!UBERON:0005282;1.33e-09;2!UBERON:0005281;1.33e-09;2!UBERON:0000010;2.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.26e-18,1;UBERON:0007645,5.26e-18,1;UBERON:0007647,5.26e-18,1;UBERON:0010115,5.26e-18,1;UBERON:0000013,1.72e-14,5;UBERON:0002410,1.72e-14,5;UBERON:0001876,8.69e-10,2;UBERON:0002360,1.12e-09,2;UBERON:0000094,1.12e-09,2;UBERON:0010743,1.12e-09,2;UBERON:0005629,1.57e-09,2;UBERON:0005358,1.57e-09,2;UBERON:0001886,1.57e-09,2;UBERON:0004086,1.57e-09,2;UBERON:0005282,1.57e-09,2;UBERON:0005281,1.57e-09,2;UBERON:0000007,1.71e-09,2;UBERON:0000010,1.83e-08,8;UBERON:0001016,1.90e-08,89;UBERON:0004121,5.46e-07,171;UBERON:0000924,5.46e-07,171;UBERON:0006601,5.46e-07,171 | |||
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| ||
|short_description=p7@EYA1 | |||
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Latest revision as of 00:38, 19 September 2015
Short description: | p7@EYA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EYA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000465115_5end |
EntrezGene: | EYA1 |
HGNC: | 3519 |
UniProt: | E5RIQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
dura mater | 5.26e-18 | 1 |
future meninx | 5.26e-18 | 1 |
ectomeninx | 5.26e-18 | 1 |
future dura mater | 5.26e-18 | 1 |
sympathetic nervous system | 1.72e-14 | 5 |
autonomic nervous system | 1.72e-14 | 5 |
amygdala | 8.69e-10 | 2 |
meninx | 1.12e-09 | 2 |
membrane organ | 1.12e-09 | 2 |
meningeal cluster | 1.12e-09 | 2 |
vascular plexus | 1.57e-09 | 2 |
ventricle of nervous system | 1.57e-09 | 2 |
choroid plexus | 1.57e-09 | 2 |
brain ventricle | 1.57e-09 | 2 |
ventricular system of brain | 1.57e-09 | 2 |
ventricular system of central nervous system | 1.57e-09 | 2 |
pituitary gland | 1.71e-09 | 2 |
peripheral nervous system | 1.83e-08 | 8 |
nervous system | 1.90e-08 | 89 |
ectoderm-derived structure | 5.46e-07 | 171 |
ectoderm | 5.46e-07 | 171 |
presumptive ectoderm | 5.46e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.56e-16 | 10 |
neuroendocrine tumor | 3.08e-12 | 6 |
germ cell and embryonal cancer | 1.77e-07 | 22 |
germ cell cancer | 1.77e-07 | 22 |