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{{FFCP|DPIdataset=robustDPI|EntrezGene=57408|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25023|TSSclassifier=S|UniProt=Q9HBL6|association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end|coexpression_cluster_id=C24|description=CAGE_peak_4_at_LRTM1_5end|id=chr3:54962005..54962014,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!1.30e-37!2;UBERON:0002757!1.30e-37!2;UBERON:0010134!1.30e-37!2;UBERON:0002784!1.30e-37!2;UBERON:0005408!1.30e-37!2;UBERON:0001899!1.30e-37!2;UBERON:0002426!1.88e-19!1;UBERON:0003831!1.88e-19!1;UBERON:0003898!1.88e-19!1;UBERON:0004830!1.88e-19!1;UBERON:0001774!1.88e-19!1;UBERON:0003830!1.88e-19!1;UBERON:0005175!1.88e-19!1;UBERON:0003897!1.88e-19!1;UBERON:0001103!1.88e-19!1;UBERON:0010084!1.88e-19!1;UBERON:0003296!2.26e-19!4;UBERON:0010133!2.26e-19!4;UBERON:0001894!1.68e-11!7;UBERON:0006222!1.68e-11!7;UBERON:0000341!1.89e-10!2;UBERON:0001630!2.07e-10!2;UBERON:0005090!2.07e-10!2;UBERON:0002360!2.72e-10!2;UBERON:0000094!2.72e-10!2;UBERON:0007645!2.72e-10!2;UBERON:0003127!3.27e-10!2;UBERON:0000020!1.19e-07!23;UBERON:0001032!2.35e-07!24;UBERON:0004456!2.35e-07!24;UBERON:0001723!2.97e-07!3;UBERON:0001033!2.97e-07!3;UBERON:0010056!2.97e-07!3|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0000341;9.18e-26;2!UBERON:0000974;1.57e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000341,9.18e-26,2;UBERON:0002368,9.98e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4636009733058,41.3628978329153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p4@LRTM1}}
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=57408
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=25023
|TSSclassifier=strong
|UniProt=Q9HBL6
|association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end
|cluster_id=chr3:54962005..54962014,-
|coexpression_cluster_id=C24
|description=CAGE_peak_4_at_LRTM1_5end
|id=chr3:54962005..54962014,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001905!1.30e-37!2;UBERON:0002757!1.30e-37!2;UBERON:0010134!1.30e-37!2;UBERON:0002784!1.30e-37!2;UBERON:0005408!1.30e-37!2;UBERON:0001899!1.30e-37!2;UBERON:0002426!1.88e-19!1;UBERON:0003831!1.88e-19!1;UBERON:0003898!1.88e-19!1;UBERON:0004830!1.88e-19!1;UBERON:0001774!1.88e-19!1;UBERON:0003830!1.88e-19!1;UBERON:0005175!1.88e-19!1;UBERON:0003897!1.88e-19!1;UBERON:0001103!1.88e-19!1;UBERON:0010084!1.88e-19!1;UBERON:0003296!2.26e-19!4;UBERON:0010133!2.26e-19!4;UBERON:0001894!1.68e-11!7;UBERON:0006222!1.68e-11!7;UBERON:0000341!1.89e-10!2;UBERON:0001630!2.07e-10!2;UBERON:0005090!2.07e-10!2;UBERON:0002360!2.72e-10!2;UBERON:0000094!2.72e-10!2;UBERON:0007645!2.72e-10!2;UBERON:0003127!3.27e-10!2;UBERON:0000020!1.19e-07!23;UBERON:0001032!2.35e-07!24;UBERON:0004456!2.35e-07!24;UBERON:0001723!2.97e-07!3;UBERON:0001033!2.97e-07!3;UBERON:0010056!2.97e-07!3
|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0000341;9.18e-26;2!UBERON:0000974;1.57e-09;6
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000341,9.18e-26,2;UBERON:0002368,9.98e-07,35
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4636009733058,41.3628978329153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0
|short_description=p4@LRTM1
}}

Latest revision as of 02:25, 19 September 2015

Short description:p4@LRTM1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_LRTM1_5end
Coexpression cluster:C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral
Association with transcript: 57bp_to_NM_020678, uc003dhl.2_5end
EntrezGene:LRTM1
HGNC: 25023
UniProt: Q9HBL6
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data