FFCP PHASE1:Hg19::chr11:64323396..64323421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55867 | |EntrezGene=55867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18120 | |HGNC=18120 | ||
|TSSclassifier=strong | |||
|UniProt=A6NCG2 | |UniProt=A6NCG2 | ||
|association_with_transcript=-6bp_to_ENST00000377581_5end | |association_with_transcript=-6bp_to_ENST00000377581_5end | ||
|cluster_id=chr11:64323396..64323421,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_SLC22A11_5end | |description=CAGE_peak_1_at_SLC22A11_5end | ||
|id=chr11:64323396..64323421,+ | |id=chr11:64323396..64323421,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.31e-10!7;CL:0000586!1.31e-10!7;CL:0000181!3.64e-09!12;CL:0000417!3.64e-09!12;CL:0000668!3.64e-09!12;CL:0000414!3.64e-09!12;CL:0000412!3.64e-09!12;CL:0000182!3.64e-09!12 | |ontology_enrichment_celltype=CL:0000039!1.31e-10!7;CL:0000586!1.31e-10!7;CL:0000181!3.64e-09!12;CL:0000417!3.64e-09!12;CL:0000668!3.64e-09!12;CL:0000414!3.64e-09!12;CL:0000412!3.64e-09!12;CL:0000182!3.64e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.43e-14;7!CL:0000586;5.43e-14;7!CL:0002563;3.15e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.68e-14,7;CL:0000586,5.68e-14,7;CL:0002563,3.07e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.63e-12;1!UBERON:0003104;2.86e-12;31!UBERON:0003918;4.18e-10;10!UBERON:0007687;4.18e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.64e-12;1!DOID:10165;8.64e-12;1!DOID:1798;8.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.64e-12,1;DOID:10165,8.64e-12,1;DOID:1798,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!4.22e-10!11;UBERON:0003101!4.56e-09!22;UBERON:0000079!4.56e-09!22;UBERON:0007023!4.60e-08!115;UBERON:0006947!3.01e-07!3;UBERON:0004054!3.01e-07!3;UBERON:0005156!6.54e-07!59;UBERON:0000990!6.54e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.99e-15;3!UBERON:0004054;3.99e-15;3!UBERON:0001301;4.06e-12;1!UBERON:0001000;7.76e-12;1!UBERON:0005352;7.76e-12;1!UBERON:0005904;1.40e-11;4!UBERON:0001052;2.13e-11;4!UBERON:0001242;3.15e-11;4!UBERON:0001262;3.15e-11;4!UBERON:0004786;3.15e-11;4!UBERON:0004808;3.15e-11;4!UBERON:0001277;3.15e-11;4!UBERON:0004907;2.68e-09;5!UBERON:0000485;8.71e-07;7!UBERON:0003929;8.71e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.99e-15,3;UBERON:0004054,3.99e-15,3;UBERON:0001301,4.06e-12,1;UBERON:0001000,7.76e-12,1;UBERON:0005352,7.76e-12,1;UBERON:0005904,1.40e-11,4;UBERON:0001052,2.02e-11,4;UBERON:0001242,3.07e-11,4;UBERON:0001262,3.07e-11,4;UBERON:0004786,3.07e-11,4;UBERON:0004808,3.07e-11,4;UBERON:0001277,3.07e-11,4;UBERON:0004907,2.57e-09,5;UBERON:0006554,9.93e-08,47;UBERON:0001008,1.47e-07,48;UBERON:0002113,9.50e-07,26;UBERON:0003918,9.50e-07,26;UBERON:0011143,9.50e-07,26;UBERON:0005095,9.50e-07,26;UBERON:0007687,9.50e-07,26 | |||
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| ||
|short_description=p1@SLC22A11 | |short_description=p1@SLC22A11 | ||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p1@SLC22A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A11_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -6bp_to_ENST00000377581_5end |
EntrezGene: | SLC22A11 |
HGNC: | 18120 |
UniProt: | A6NCG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.68e-14 | 7 |
germ cell | 5.68e-14 | 7 |
intestinal epithelial cell | 3.07e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.99e-15 | 3 |
internal male genitalia | 3.99e-15 | 3 |
epididymis | 4.06e-12 | 1 |
vas deferens | 7.76e-12 | 1 |
spermatic cord | 7.76e-12 | 1 |
duct of male reproductive system | 1.40e-11 | 4 |
rectum | 2.02e-11 | 4 |
intestinal mucosa | 3.07e-11 | 4 |
wall of intestine | 3.07e-11 | 4 |
gastrointestinal system mucosa | 3.07e-11 | 4 |
gastrointestinal system epithelium | 3.07e-11 | 4 |
intestinal epithelium | 3.07e-11 | 4 |
lower digestive tract | 2.57e-09 | 5 |
urinary system structure | 9.93e-08 | 47 |
renal system | 1.47e-07 | 48 |
kidney | 9.50e-07 | 26 |
kidney mesenchyme | 9.50e-07 | 26 |
upper urinary tract | 9.50e-07 | 26 |
kidney rudiment | 9.50e-07 | 26 |
kidney field | 9.50e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.64e-12 | 1 |
endocrine pancreas cancer | 8.64e-12 | 1 |
pancreatic endocrine carcinoma | 8.64e-12 | 1 |