FFCP PHASE1:Hg19::chr11:64612118..64612152,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55561 | |EntrezGene=55561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29829 | |HGNC=29829 | ||
|TSSclassifier=strong | |||
|UniProt=Q6DT37 | |UniProt=Q6DT37 | ||
|association_with_transcript=-77bp_to_ENST00000342711,NM_017525,uc001obs.3_5end | |association_with_transcript=-77bp_to_ENST00000342711,NM_017525,uc001obs.3_5end | ||
|cluster_id=chr11:64612118..64612152,- | |||
|description=CAGE_peak_1_at_CDC42BPG_5end | |description=CAGE_peak_1_at_CDC42BPG_5end | ||
|id=chr11:64612118..64612152,- | |id=chr11:64612118..64612152,- | ||
|ontology_enrichment_celltype=CL:0000066!1.34e-20!254;CL:0002076!1.33e-14!43;CL:0000223!2.30e-11!59;CL:0002251!6.73e-10!21;CL:0002159!1.36e-08!13 | |ontology_enrichment_celltype=CL:0000066!1.34e-20!254;CL:0002076!1.33e-14!43;CL:0000223!2.30e-11!59;CL:0002251!6.73e-10!21;CL:0002159!1.36e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002251;6.01e-17;20!CL:0002076;1.30e-14;42!CL:0000244;1.37e-10;4!CL:0000731;1.37e-10;4!CL:0002621;9.68e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.70e-17,42;CL:0002251,6.39e-17,20;CL:0000223,2.20e-12,58;CL:0000066,2.93e-11,253;CL:0000244,1.80e-10,4;CL:0000731,1.80e-10,4;CL:0002621,7.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.19e-09;3 | |||
|ontology_enrichment_disease=DOID:305!4.17e-19!106;DOID:0050687!2.13e-12!143;DOID:1749!5.44e-11!14;DOID:299!1.33e-07!25 | |ontology_enrichment_disease=DOID:305!4.17e-19!106;DOID:0050687!2.13e-12!143;DOID:1749!5.44e-11!14;DOID:299!1.33e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.17e-11;4!DOID:1612;2.17e-11;4!DOID:299;6.98e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.72e-11,4;DOID:1612,1.72e-11,4;DOID:299,1.11e-07,25;DOID:305,1.56e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.18e-15!169;UBERON:0000925!2.18e-15!169;UBERON:0006595!2.18e-15!169;UBERON:0001007!2.79e-10!155;UBERON:0001555!2.79e-10!155;UBERON:0007026!2.79e-10!155;UBERON:0000077!6.20e-09!130;UBERON:0005631!6.63e-09!14;UBERON:0000158!6.63e-09!14;UBERON:0001004!1.83e-08!72;UBERON:0005911!1.84e-08!82;UBERON:0004921!2.24e-08!129;UBERON:0004185!2.24e-08!129;UBERON:0000161!3.33e-07!35;UBERON:0000344!4.29e-07!12;UBERON:0005156!8.09e-07!59;UBERON:0000990!8.09e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.76e-12;5!UBERON:0000486;7.80e-12;12!UBERON:0000344;1.09e-11;20!UBERON:0005910;2.52e-10;6!UBERON:0003350;6.67e-10;8!UBERON:0001555;1.20e-09;54!UBERON:0000165;1.27e-09;28!UBERON:0004921;3.98e-09;33!UBERON:0000161;1.31e-08;19!UBERON:0000166;1.31e-08;19!UBERON:0003929;3.85e-08;7!UBERON:0003729;6.03e-08;13!UBERON:0001723;9.68e-08;3!UBERON:0001949;9.68e-08;3!UBERON:0001033;9.68e-08;3!UBERON:0006947;2.26e-07;3!UBERON:0004054;2.26e-07;3!UBERON:0005911;6.37e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.32e-14,160;UBERON:0000925,1.32e-14,160;UBERON:0006595,1.32e-14,160;UBERON:0000365,3.16e-12,5;UBERON:0000344,1.18e-11,20;UBERON:0000166,7.01e-11,22;UBERON:0005631,2.49e-10,14;UBERON:0000158,2.49e-10,14;UBERON:0005910,4.07e-10,6;UBERON:0003350,6.73e-10,8;UBERON:0000161,2.06e-09,36;UBERON:0000165,3.60e-09,29;UBERON:0000930,3.60e-09,29;UBERON:0001007,1.33e-08,145;UBERON:0001555,1.33e-08,145;UBERON:0007026,1.33e-08,145;UBERON:0004923,3.55e-08,66;UBERON:0003729,5.70e-08,13;UBERON:0001949,7.30e-08,3;UBERON:0001723,8.41e-08,3;UBERON:0001033,8.41e-08,3;UBERON:0010056,8.41e-08,3;UBERON:0006947,2.18e-07,3;UBERON:0004054,2.18e-07,3;UBERON:0000478,7.15e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.655324116390517,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,3.64295288292542,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,1.36373060295417,2.00763216772303,0.731842236777572,0.662648841607426,0.813357600086629,1.0366105501537,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,1.8448265781467,0,0.878002283269004,1.1240175325762,0.603173834469785,1.38882667737794,0,0,0,0,0.117408694235822,0,0,0,7.90204397959275,6.86788929675898,0,0,0,0.93733833986777,0.503946384596579,0.708875486211932,0.268675568108545,1.74380363108377,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0.909382714338778,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.40101294060657,1.28913384510255,0,0,0,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,1.34533047155574,3.1903178123646,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,1.03558180854457,1.29151611801369,5.05414427002877,2.21715076768338,2.52695740227655,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.561421621224659,0,0,0,0,2.3874448473769,1.78178808499583,3.37876772309155,0,0,0,0,0.211125408127993,0.597743964753209,0.276283915531148,0.503865495708552,0.20453736500431,0,0,0.988551862620595,0.358042349351218,0,0.295930216910801,0,0,0,0,0,2.86470537193757,3.49839999984783,1.44999915086959,1.0241410345695,1.5255219017566,1.65471377237555,0.344743373241465,0,0,0,0,6.10326945268333,3.64911557773041,2.95547618953547,0,0,1.25481369850743,0.769502585037971,0,1.84451123510448,1.25660702173681,0.760531603454056,0.31900115973192,0.366390373607449,2.66517388009317,0,0,0,0.451191321234361,0.980312671588698,0.839107934879214,0,0,0.421996129056054,0.163232808159148,1.13082457147153,0,1.99052386215701,1.68069372556344,0,0,0,0,0.067401132980677,0,0,0,2.15231080825299,0,1.18375320854817,0,0,0,0,0.414752765588989,0,0,0,0,0,0,3.12407529003236,0.489961987071888,0.609414446062818,1.57254001417827,0,0.483781656445426,0.219267951258557,0.410577285266046,1.74580229679155,0,0,0,0,0,3.32437350649165,0.160317640503067,2.77488893161158,0.999048047910651,0.72045208577053,0,0,0,0,5.1852687615695,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0.482259445395058,0.825236619583403,1.24632101408756,0.674921674654501,7.7380195455795,0,0.335434687599266,0.394028536495991,0.419636705079985,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,1.06787412567695,0.157204305099666,0,0,0,0.365377795142688,1.27668251554036,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0.419638523158333,1.86623178009892,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,1.1796972334774,2.75142897782519,1.61735932610474,0,0,0,0.300841313397029,0,1.56302802246618,0.523813388962845,0,1.18284868973636,0,0,0,0,0,0,0.992422356778588,0,2.6830109804315,0,0,0.606965604236632,0.91064876540519,1.95145214357805,0,0,0.135939465953663,0,0.118193840883968,0.222462803784138,0.941917114206168,0,1.68163297988273,0,0,0.47775168788705,0.142953088353313,0.47404083519818,0,0,0,0,0,2.07377898544228,2.15113679410139,0,0,1.69354820076372,2.06196181689645,0,0,1.56597604516909,1.07965256976767,0.853425474875886,0,0,0,1.94284397223656,0.467878926924211,0.795803100645473,0,0.90356865631168,0,0.754814217833368,3.39566295674957,0.218559560503957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| ||
|short_description=p1@CDC42BPG | |short_description=p1@CDC42BPG | ||
}} | }} |
Latest revision as of 04:47, 19 September 2015
Short description: | p1@CDC42BPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC42BPG_5end |
Coexpression cluster: | NA |
Association with transcript: | -77bp_to_ENST00000342711, NM_017525, uc001obs.3_5end |
EntrezGene: | CDC42BPG |
HGNC: | 29829 |
UniProt: | Q6DT37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.70e-17 | 42 |
epithelial cell of alimentary canal | 6.39e-17 | 20 |
endodermal cell | 2.20e-12 | 58 |
epithelial cell | 2.93e-11 | 253 |
transitional epithelial cell | 1.80e-10 | 4 |
urothelial cell | 1.80e-10 | 4 |
gingival epithelial cell | 7.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.32e-14 | 160 |
endoderm | 1.32e-14 | 160 |
presumptive endoderm | 1.32e-14 | 160 |
urothelium | 3.16e-12 | 5 |
mucosa | 1.18e-11 | 20 |
oral opening | 7.01e-11 | 22 |
extraembryonic membrane | 2.49e-10 | 14 |
membranous layer | 2.49e-10 | 14 |
transitional epithelium | 4.07e-10 | 6 |
epithelium of mucosa | 6.73e-10 | 8 |
orifice | 2.06e-09 | 36 |
mouth | 3.60e-09 | 29 |
stomodeum | 3.60e-09 | 29 |
digestive system | 1.33e-08 | 145 |
digestive tract | 1.33e-08 | 145 |
primitive gut | 1.33e-08 | 145 |
organ component layer | 3.55e-08 | 66 |
mouth mucosa | 5.70e-08 | 13 |
gingival epithelium | 7.30e-08 | 3 |
tongue | 8.41e-08 | 3 |
gustatory system | 8.41e-08 | 3 |
future tongue | 8.41e-08 | 3 |
male genital duct | 2.18e-07 | 3 |
internal male genitalia | 2.18e-07 | 3 |
extraembryonic structure | 7.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.72e-11 | 4 |
breast cancer | 1.72e-11 | 4 |
adenocarcinoma | 1.11e-07 | 25 |
carcinoma | 1.56e-07 | 106 |