FFCP PHASE1:Hg19::chr5:90195083..90195098,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84059 | |EntrezGene=84059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17416 | |HGNC=17416 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc003kjx.2_5end | |association_with_transcript=4bp_to_uc003kjx.2_5end | ||
|cluster_id=chr5:90195083..90195098,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_6_at_GPR98_5end | |description=CAGE_peak_6_at_GPR98_5end | ||
|id=chr5:90195083..90195098,+ | |id=chr5:90195083..90195098,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.61e-33!12;CL:0000417!1.61e-33!12;CL:0000668!1.61e-33!12;CL:0000414!1.61e-33!12;CL:0000412!1.61e-33!12;CL:0000182!1.61e-33!12;CL:0000223!1.86e-15!59;CL:0002563!1.49e-09!4 | |ontology_enrichment_celltype=CL:0000181!1.61e-33!12;CL:0000417!1.61e-33!12;CL:0000668!1.61e-33!12;CL:0000414!1.61e-33!12;CL:0000412!1.61e-33!12;CL:0000182!1.61e-33!12;CL:0000223!1.86e-15!59;CL:0002563!1.49e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.77e-21;12!CL:0002563;2.44e-16;4!CL:0002253;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.12e-21,12;CL:0002563,2.44e-16,4;CL:0000223,1.40e-12,58;CL:0002253,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.95e-13;11!UBERON:0003104;3.38e-12;31!UBERON:0009497;4.02e-11;13!CL:0000223;4.78e-09;58 | |||
|ontology_enrichment_disease=DOID:7!4.15e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.33e-38!25;UBERON:0000015!1.33e-38!25;UBERON:0002423!1.33e-38!25;UBERON:0006235!1.33e-38!25;UBERON:0004161!1.33e-38!25;UBERON:0008835!1.86e-36!22;UBERON:0003894!1.86e-36!22;UBERON:0009854!8.29e-35!23;UBERON:0002107!1.62e-34!19;UBERON:0006925!1.62e-34!19;UBERON:0008836!1.62e-34!19;UBERON:0003929!2.95e-32!54;UBERON:0007499!6.61e-32!25;UBERON:0009856!1.27e-30!26;UBERON:0005057!1.44e-30!26;UBERON:0005911!2.53e-23!82;UBERON:0002368!2.54e-22!35;UBERON:0002365!1.12e-20!31;UBERON:0002330!1.12e-20!31;UBERON:0005172!6.89e-20!55;UBERON:0005173!6.89e-20!55;UBERON:0002417!9.83e-18!61;UBERON:0000916!9.83e-18!61;UBERON:0000949!5.07e-17!45;UBERON:0002530!2.10e-15!59;UBERON:0004921!1.19e-13!129;UBERON:0004185!1.19e-13!129;UBERON:0000490!1.08e-12!138;UBERON:0001007!1.66e-12!155;UBERON:0001555!1.66e-12!155;UBERON:0007026!1.66e-12!155;UBERON:0000077!8.32e-12!130;UBERON:0004119!3.15e-11!169;UBERON:0000925!3.15e-11!169;UBERON:0006595!3.15e-11!169;UBERON:0005177!5.90e-11!107;UBERON:0009569!2.97e-10!113;UBERON:0001041!3.38e-10!98;UBERON:0001242!1.49e-09!4;UBERON:0001262!1.49e-09!4;UBERON:0004786!1.49e-09!4;UBERON:0004808!1.49e-09!4;UBERON:0001277!1.49e-09!4;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0003104!3.33e-08!238;UBERON:0009142!3.33e-08!238;UBERON:0003350!8.25e-08!5;UBERON:0005256!1.26e-07!143;UBERON:0000466!1.65e-07!126;UBERON:0002100!4.60e-07!216;UBERON:0003914!8.98e-07!118 | |ontology_enrichment_uberon=UBERON:0009497!1.33e-38!25;UBERON:0000015!1.33e-38!25;UBERON:0002423!1.33e-38!25;UBERON:0006235!1.33e-38!25;UBERON:0004161!1.33e-38!25;UBERON:0008835!1.86e-36!22;UBERON:0003894!1.86e-36!22;UBERON:0009854!8.29e-35!23;UBERON:0002107!1.62e-34!19;UBERON:0006925!1.62e-34!19;UBERON:0008836!1.62e-34!19;UBERON:0003929!2.95e-32!54;UBERON:0007499!6.61e-32!25;UBERON:0009856!1.27e-30!26;UBERON:0005057!1.44e-30!26;UBERON:0005911!2.53e-23!82;UBERON:0002368!2.54e-22!35;UBERON:0002365!1.12e-20!31;UBERON:0002330!1.12e-20!31;UBERON:0005172!6.89e-20!55;UBERON:0005173!6.89e-20!55;UBERON:0002417!9.83e-18!61;UBERON:0000916!9.83e-18!61;UBERON:0000949!5.07e-17!45;UBERON:0002530!2.10e-15!59;UBERON:0004921!1.19e-13!129;UBERON:0004185!1.19e-13!129;UBERON:0000490!1.08e-12!138;UBERON:0001007!1.66e-12!155;UBERON:0001555!1.66e-12!155;UBERON:0007026!1.66e-12!155;UBERON:0000077!8.32e-12!130;UBERON:0004119!3.15e-11!169;UBERON:0000925!3.15e-11!169;UBERON:0006595!3.15e-11!169;UBERON:0005177!5.90e-11!107;UBERON:0009569!2.97e-10!113;UBERON:0001041!3.38e-10!98;UBERON:0001242!1.49e-09!4;UBERON:0001262!1.49e-09!4;UBERON:0004786!1.49e-09!4;UBERON:0004808!1.49e-09!4;UBERON:0001277!1.49e-09!4;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0003104!3.33e-08!238;UBERON:0009142!3.33e-08!238;UBERON:0003350!8.25e-08!5;UBERON:0005256!1.26e-07!143;UBERON:0000466!1.65e-07!126;UBERON:0002100!4.60e-07!216;UBERON:0003914!8.98e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-28;19!UBERON:0006925;1.04e-28;19!UBERON:0002423;8.45e-22;25!UBERON:0002365;1.29e-17;31!UBERON:0002330;1.29e-17;31!UBERON:0001242;2.44e-16;4!UBERON:0001262;2.44e-16;4!UBERON:0004786;2.44e-16;4!UBERON:0004808;2.44e-16;4!UBERON:0001277;2.44e-16;4!UBERON:0002368;4.88e-15;33!UBERON:0005172;2.80e-10;52!UBERON:0005173;2.80e-10;52!UBERON:0000485;9.52e-10;7!UBERON:0003929;9.52e-10;7!UBERON:0000949;6.69e-09;43!UBERON:0003350;1.22e-08;8!UBERON:0001007;2.28e-08;81!UBERON:0002530;1.02e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.91e-29,19;UBERON:0006925,9.91e-29,19;UBERON:0008836,9.91e-29,19;UBERON:0008835,8.38e-25,22;UBERON:0003894,8.38e-25,22;UBERON:0009854,1.01e-23,23;UBERON:0003929,3.19e-22,54;UBERON:0007499,8.15e-22,25;UBERON:0009497,8.15e-22,25;UBERON:0000015,8.15e-22,25;UBERON:0002423,8.15e-22,25;UBERON:0006235,8.15e-22,25;UBERON:0004161,8.15e-22,25;UBERON:0009856,5.68e-21,26;UBERON:0002365,1.44e-17,31;UBERON:0002330,1.44e-17,31;UBERON:0001242,2.44e-16,4;UBERON:0001262,2.44e-16,4;UBERON:0004786,2.44e-16,4;UBERON:0004808,2.44e-16,4;UBERON:0001277,2.44e-16,4;UBERON:0002368,1.53e-15,35;UBERON:0005911,2.20e-14,82;UBERON:0005172,2.07e-13,54;UBERON:0005173,2.07e-13,54;UBERON:0002530,2.54e-12,59;UBERON:0000949,4.83e-12,45;UBERON:0002417,5.02e-12,60;UBERON:0000916,5.02e-12,60;UBERON:0004921,1.18e-09,118;UBERON:0003350,1.22e-08,8;UBERON:0000485,8.90e-08,9;UBERON:0001007,1.05e-07,145;UBERON:0001555,1.05e-07,145;UBERON:0007026,1.05e-07,145;UBERON:0000490,1.37e-07,148;UBERON:0005177,6.08e-07,101;UBERON:0003104,6.59e-07,160;UBERON:0009142,6.59e-07,160;UBERON:0004119,6.68e-07,160;UBERON:0000925,6.68e-07,160;UBERON:0006595,6.68e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,9.82827216677626,4.13552934676983,0,35.5436587389598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0608785450469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.329663433524666,0.471824806979294,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0.630445658393585,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54311924402056,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,9.82827216677626,4.13552934676983,0,35.5436587389598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0608785450469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.329663433524666,0.471824806979294,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0.630445658393585,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54311924402056,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@GPR98 | |short_description=p6@GPR98 | ||
}} | }} |
Latest revision as of 04:52, 19 September 2015
Short description: | p6@GPR98 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPR98_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 4bp_to_uc003kjx.2_5end |
EntrezGene: | GPR98 |
HGNC: | 17416 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.12e-21 | 12 |
intestinal epithelial cell | 2.44e-16 | 4 |
endodermal cell | 1.40e-12 | 58 |
epithelial cell of large intestine | 7.49e-09 | 2 |