FFCP PHASE1:Hg19::chr18:29264511..29264551,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29264511..29264551,- to FFCP PHASE1:Hg19::chr18:29264511..29264551,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9331 | |EntrezGene=9331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=929 | |HGNC=929 | ||
|TSSclassifier=strong | |||
|UniProt=G3XA83 | |UniProt=G3XA83 | ||
|association_with_transcript=0bp_to_ENST00000237019_5end | |||
|cluster_id=chr18:29264511..29264551,- | |||
|description=CAGE_peak_1_at_B4GALT6_5end | |||
|id=chr18:29264511..29264551,- | |||
|ontology_enrichment_celltype=CL:0002321!3.43e-16!248;CL:0000220!1.65e-15!246;CL:0002139!2.20e-12!24;CL:0000222!5.95e-10!119;CL:0000071!5.88e-09!18;CL:0002546!5.88e-09!18;CL:0000115!7.69e-09!35;CL:0002078!9.75e-09!44;CL:0000055!7.45e-08!180;CL:0000213!7.50e-07!57;CL:0000215!7.50e-07!57;CL:0000148!8.62e-07!10;CL:0000541!8.62e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-18;24!CL:0000071;1.12e-12;18!CL:0000115;4.27e-11;36!CL:0000148;1.21e-10;10!CL:0002078;2.55e-08;45!CL:0002543;4.07e-08;6!CL:0002138;1.17e-07;6!CL:0000147;6.72e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.78e-19,24;CL:0000115,3.74e-14,36;CL:0000071,3.58e-13,18;CL:0002546,3.58e-13,18;CL:0002078,6.17e-12,45;CL:0000148,4.68e-11,10;CL:0000541,4.68e-11,10;CL:0002321,6.82e-10,250;CL:0000333,8.71e-09,41;CL:0002543,2.46e-08,6;CL:0000213,2.69e-08,58;CL:0000215,2.69e-08,58;CL:0005020,6.72e-08,6;CL:0002138,6.72e-08,6;CL:0005022,6.72e-08,6;CL:0000133,3.30e-07,59;CL:0000147,3.57e-07,14;CL:0000222,7.49e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.12e-12;18!CL:0005022;1.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.72e-11!312;UBERON:0000483!2.29e-11!309;UBERON:0000055!3.05e-11!69;UBERON:0000025!5.42e-11!194;UBERON:0002049!9.66e-11!79;UBERON:0007798!9.66e-11!79;UBERON:0001981!5.87e-10!60;UBERON:0007500!5.87e-10!60;UBERON:0004537!5.87e-10!60;UBERON:0006965!5.87e-10!60;UBERON:0001986!5.88e-09!18;UBERON:0004638!5.88e-09!18;UBERON:0004852!5.88e-09!18;UBERON:0004111!8.21e-09!241;UBERON:0004872!1.70e-08!84;UBERON:0001017!6.66e-08!82;UBERON:0004535!8.22e-08!110;UBERON:0005743!9.22e-08!86;UBERON:0000487!1.14e-07!22;UBERON:0000073!2.14e-07!94;UBERON:0001016!2.14e-07!94;UBERON:0003914!2.68e-07!118;UBERON:0001009!5.02e-07!113;UBERON:0001637!9.62e-07!42;UBERON:0003509!9.62e-07!42;UBERON:0004572!9.62e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.12e-12;18!UBERON:0001986;1.12e-12;18!UBERON:0004852;1.12e-12;18!UBERON:0000487;1.44e-09;22!UBERON:0000055;8.62e-09;65!UBERON:0001638;2.49e-08;9!UBERON:0003920;2.49e-08;9!UBERON:0004582;2.49e-08;9!UBERON:0006914;6.44e-08;25!UBERON:0007500;7.18e-08;56!UBERON:0001981;7.18e-08;56!UBERON:0004537;7.18e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.32e-15,68;UBERON:0004638,3.58e-13,18;UBERON:0001986,3.58e-13,18;UBERON:0004852,3.58e-13,18;UBERON:0002049,6.36e-13,78;UBERON:0007798,6.36e-13,78;UBERON:0007500,2.49e-12,59;UBERON:0001981,2.49e-12,59;UBERON:0004537,2.49e-12,59;UBERON:0006965,2.49e-12,59;UBERON:0004872,2.13e-11,83;UBERON:0004535,5.42e-10,109;UBERON:0000487,5.93e-10,22;UBERON:0001009,2.09e-09,112;UBERON:0001638,1.59e-08,9;UBERON:0003920,1.59e-08,9;UBERON:0004582,1.59e-08,9;UBERON:0006914,3.03e-08,25;UBERON:0003914,4.72e-07,117 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0.672325146451775,1.20538905604795,2.92124036154949,1.95173119516203,0.123121058076788,0.408001382488506,0,0,0.547497700291537,1.12988375635323,3.132949635666,3.36612416744778,3.46327437780189,0,0,0,0,0.30120591877825,0.739508020333575,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,0.560508562981536,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0.361439152384566,0,0.724232594804119,1.5905718941022,0.486634870302636,0.661743720148475,0,0.351339142772504,0.0654895377488563,1.09288586487763,0.370784442784429,0,0,0,0,0,0,1.98762407366705,1.72046919021225,0.694281003215189,1.69592382577203,2.51699661725944,1.37559020970034,1.46296476575767,2.32575083252396,1.77883131343355,2.00832367658802,1.20848795132744,3.04108842287405,0.488124115096339,2.20597848207521,0,3.12549048994279,1.79623498100936,1.35133776579987,6.13266549863533,2.84779697870439,3.48083313467774,0,0,0,0,1.13967460498122,0.794455084879313,2.29469296599051,0.354668382198357,0,2.1349799145941,0.24666754841716,0,1.0776853765575,4.41347138406339,0,0.576175924479999,0.468642863667593,0,1.1409436430889,0.149448680551801,0.469737994575059,0.323745888736263,0.280901613404497,0.204154171254893,0.737005903870608,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0,1.92834711372036,0.179389635688862,0.213557388818567,0.423863802319124,0,0.412210116953756,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.403008392910561,0,0.57978255948989,0.818238361772504,0,1.58565817968474,1.59035721985782,1.39432731443422,1.65857688024593,1.51392510525377,1.09493207722749,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,0,0,0.983907508344908,0.171567810298526,0.329250856225877,0,0.402115889646523,0.462942225792648,0.651616610620649,1.03993478527958,0,0.463721619900307,1.05667824812239,1.73239737313289,2.31492756288305,2.28304982681518,0,0,0,0.468008530278475,0.445893486866185,0.93733833986777,0.503946384596579,0,0.716468181622786,1.16253575405585,0.766765358330422,0,0,0,0,0,1.52394946301206,3.4378958300245,1.17217447210047,1.71072446022705,1.85089486865982,6.60754727256618,2.00078502841405,0.784917590417525,0,0.5867062865676,1.16344544182,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,1.50719688529793,0.871533458600294,0.699810938274399,0,0,0,0,0,0,1.01346914667305,0,0.537182889719687,0,0,0,0,1.77866236955724,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0.616838775210622,1.24293207719189,1.8067974323038,4.67328986265259,1.62694529843943,1.57117284469109,0.40101294060657,0.0920809889358963,0,0.364182336013434,0,0.451199612907412,1.00119938235739,0,0,0.844413031143006,1.13733384070897,0.340187410553031,0.431831832204279,0,0,0.501689773854853,0.254876273045038,1.66215201785745,0.671624264166535,0,0,0.769350375349168,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.924291702687866,0.921022048356777,0.413509717453592,0.214840489736547,0,0.681813019328807,0.356128142586949,0.826424576804891,0.576570202095319,0.382838137483752,0.10115778085555,0,0.94443704049192,0,4.00443654228915,1.59691809095107,0.869932992075073,1.11194531462352,1.14499909393593,1.116475108079,0.632758849437452,0,0,0,0.318203247925937,0.78494864019923,0.899362287916574,1.09814811894422,0.824686816419805,1.01091240786658,0,2.52755073743389,0,0.487426979262569,0,0,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,1.69017361519345,1.57752487424457,1.27723753317057,0,0.354761064070598,0,0,0.379473173765715,0,0.384888450902048,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0,0,0,4.81239927631679,0,0,0.144269212976445,0.142283686696828,0,1.79621434289535,0.766021480529467,6.56188106444037,1.29848776109822,2.80797178113459,0,0,0,0.677167111206413,0,0,0,0.687010689511529,0,0,0,0,0.556812347790485,1.23087398947712,0.811367035427949,3.66379164797602,1.4098700508785,0,0,0.485442086998054,0,0.284136146806413,0,0,0,0,0.562677665642051,1.00177834520615,0.16480387422676,0,0,0,0,0.20453736500431,3.32328974744888,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.556608588971108,1.99613798001194,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0,0.723578631752448,1.52581736317083,0.995213339381022,1.47773809476774,0.658156191461918,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.366390373607449,0,2.04386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| ||
|short_description=p1@B4GALT6 | |||
}} | }} |
Latest revision as of 05:29, 19 September 2015
Short description: | p1@B4GALT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B4GALT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000237019_5end |
EntrezGene: | B4GALT6 |
HGNC: | 929 |
UniProt: | G3XA83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.78e-19 | 24 |
endothelial cell | 3.74e-14 | 36 |
blood vessel endothelial cell | 3.58e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.58e-13 | 18 |
meso-epithelial cell | 6.17e-12 | 45 |
melanocyte | 4.68e-11 | 10 |
melanoblast | 4.68e-11 | 10 |
embryonic cell | 6.82e-10 | 250 |
migratory neural crest cell | 8.71e-09 | 41 |
vein endothelial cell | 2.46e-08 | 6 |
lining cell | 2.69e-08 | 58 |
barrier cell | 2.69e-08 | 58 |
lymphangioblast | 6.72e-08 | 6 |
endothelial cell of lymphatic vessel | 6.72e-08 | 6 |
vascular lymphangioblast | 6.72e-08 | 6 |
neurectodermal cell | 3.30e-07 | 59 |
pigment cell | 3.57e-07 | 14 |
mesodermal cell | 7.49e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.32e-15 | 68 |
blood vessel endothelium | 3.58e-13 | 18 |
endothelium | 3.58e-13 | 18 |
cardiovascular system endothelium | 3.58e-13 | 18 |
vasculature | 6.36e-13 | 78 |
vascular system | 6.36e-13 | 78 |
epithelial tube open at both ends | 2.49e-12 | 59 |
blood vessel | 2.49e-12 | 59 |
blood vasculature | 2.49e-12 | 59 |
vascular cord | 2.49e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 2.13e-11 | 83 |
cardiovascular system | 5.42e-10 | 109 |
simple squamous epithelium | 5.93e-10 | 22 |
circulatory system | 2.09e-09 | 112 |
vein | 1.59e-08 | 9 |
venous blood vessel | 1.59e-08 | 9 |
venous system | 1.59e-08 | 9 |
squamous epithelium | 3.03e-08 | 25 |
epithelial tube | 4.72e-07 | 117 |