FFCP PHASE1:Hg19::chr5:92906513..92906535,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003kke.2_5end | |||
|cluster_id=chr5:92906513..92906535,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_FLJ42709_5end | |||
|id=chr5:92906513..92906535,- | |||
|ontology_enrichment_celltype=CL:0002322!1.31e-10!5;CL:0000708!1.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.94e-10;7!CL:0000586;1.94e-10;7!CL:0000708;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.04e-10,7;CL:0000586,2.04e-10,7;CL:0000708,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.86e-27;10!UBERON:0005564;4.86e-27;10!UBERON:0010115;1.03e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.57e-09;2!DOID:3095;2.31e-07;22!DOID:2994;2.31e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.22e-09,2;DOID:3095,2.21e-07,22;DOID:2994,2.21e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002616!4.63e-17!59;UBERON:0001017!8.95e-16!82;UBERON:0007023!3.78e-15!115;UBERON:0001049!8.68e-15!57;UBERON:0005068!8.68e-15!57;UBERON:0006241!8.68e-15!57;UBERON:0007135!8.68e-15!57;UBERON:0005743!1.17e-14!86;UBERON:0003075!1.51e-13!86;UBERON:0007284!1.51e-13!86;UBERON:0000955!2.89e-13!69;UBERON:0006238!2.89e-13!69;UBERON:0002346!1.37e-12!90;UBERON:0000073!1.68e-12!94;UBERON:0001016!1.68e-12!94;UBERON:0000349!4.27e-11!5;UBERON:0000473!7.36e-10!8;UBERON:0002780!1.32e-09!41;UBERON:0001890!1.32e-09!41;UBERON:0006240!1.32e-09!41;UBERON:0002020!2.02e-09!34;UBERON:0003528!2.02e-09!34;UBERON:0003080!2.77e-09!42;UBERON:0003135!3.07e-09!11;UBERON:0004121!1.30e-08!169;UBERON:0002298!1.43e-08!8;UBERON:0000924!3.39e-08!173;UBERON:0006601!3.39e-08!173;UBERON:0001893!6.71e-08!34;UBERON:0000033!1.03e-07!123;UBERON:0003210!1.19e-07!3;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0001869!2.89e-07!32;UBERON:0003076!3.00e-07!15;UBERON:0003057!3.00e-07!15;UBERON:0004733!3.65e-07!12;UBERON:0002028!3.65e-07!12;UBERON:0007277!3.65e-07!12;UBERON:0002791!4.73e-07!33;UBERON:0006331!4.83e-07!3;UBERON:0003056!8.28e-07!61;UBERON:0000988!8.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.13e-33;8!UBERON:0003135;1.26e-24;11!UBERON:0002363;1.03e-17;1!UBERON:0000991;4.36e-13;21!UBERON:0003101;1.66e-12;22!UBERON:0000079;1.66e-12;22!UBERON:0001897;1.03e-09;2!UBERON:0010225;1.03e-09;2!UBERON:0002360;1.57e-09;2!UBERON:0001954;1.57e-09;2!UBERON:0000094;1.57e-09;2!UBERON:0003022;1.57e-09;2!UBERON:0002421;1.57e-09;2!UBERON:0002600;1.57e-09;2!UBERON:0010743;1.57e-09;2!UBERON:0003210;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.23e-33,8;UBERON:0003135,1.34e-24,11;UBERON:0002363,1.70e-17,1;UBERON:0007645,1.70e-17,1;UBERON:0007647,1.70e-17,1;UBERON:0010115,1.70e-17,1;UBERON:0000991,4.50e-13,21;UBERON:0009196,4.50e-13,21;UBERON:0009117,4.50e-13,21;UBERON:0005564,4.50e-13,21;UBERON:0004176,1.71e-12,22;UBERON:0003101,1.71e-12,22;UBERON:0000079,1.71e-12,22;UBERON:0001897,1.03e-09,2;UBERON:0010225,1.03e-09,2;UBERON:0001954,1.71e-09,2;UBERON:0003022,1.71e-09,2;UBERON:0002421,1.71e-09,2;UBERON:0002600,1.71e-09,2;UBERON:0002360,2.02e-09,2;UBERON:0000094,2.02e-09,2;UBERON:0010743,2.02e-09,2;UBERON:0003210,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0.929551542956147,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,1.30788020649984,0.51336800074665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.101988829741982,2.13773924212448,0,1.25353769646188,4.54672189309436,10.1826369459348,2.48750831837634,0,0,0,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p10@FLJ42709 | |||
}} |
Latest revision as of 05:43, 19 September 2015
Short description: | p10@FLJ42709 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FLJ42709_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc003kke.2_5end |
EntrezGene: | FLJ42709 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.04e-10 | 7 |
germ cell | 2.04e-10 | 7 |
leptomeningeal cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.23e-33 | 8 |
male reproductive organ | 1.34e-24 | 11 |
dura mater | 1.70e-17 | 1 |
future meninx | 1.70e-17 | 1 |
ectomeninx | 1.70e-17 | 1 |
future dura mater | 1.70e-17 | 1 |
gonad | 4.50e-13 | 21 |
indifferent external genitalia | 4.50e-13 | 21 |
indifferent gonad | 4.50e-13 | 21 |
gonad primordium | 4.50e-13 | 21 |
external genitalia | 1.71e-12 | 22 |
male organism | 1.71e-12 | 22 |
male reproductive system | 1.71e-12 | 22 |
dorsal plus ventral thalamus | 1.03e-09 | 2 |
thalamic complex | 1.03e-09 | 2 |
Ammon's horn | 1.71e-09 | 2 |
lobe parts of cerebral cortex | 1.71e-09 | 2 |
hippocampal formation | 1.71e-09 | 2 |
limbic lobe | 1.71e-09 | 2 |
meninx | 2.02e-09 | 2 |
membrane organ | 2.02e-09 | 2 |
meningeal cluster | 2.02e-09 | 2 |
blood-cerebrospinal fluid barrier | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.22e-09 | 2 |
germ cell and embryonal cancer | 2.21e-07 | 22 |
germ cell cancer | 2.21e-07 | 22 |