FFCP PHASE1:Hg19::chr17:26711593..26711661,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:26711593..26711661,+ to FFCP PHASE1:Hg19::chr17:26711593..26711661,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23098 | |EntrezGene=23098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17074 | |HGNC=17074 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_uc002hbe.1_5end | |||
|cluster_id=chr17:26711593..26711661,+ | |||
|description=CAGE_peak_5_at_SARM1_5end | |||
|id=chr17:26711593..26711661,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-10!140;CL:0002031!3.41e-10!124;CL:0002087!8.31e-10!119;CL:0000557!1.98e-08!71;CL:0000791!2.59e-08!18;CL:0000789!2.59e-08!18;CL:0002420!2.59e-08!18;CL:0002419!2.59e-08!18;CL:0000790!2.59e-08!18;CL:0000037!8.81e-08!172;CL:0000566!8.81e-08!172;CL:0000839!1.24e-07!70;CL:0000766!1.27e-07!76;CL:0002032!2.70e-07!165;CL:0000837!2.70e-07!165;CL:0000988!5.63e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.20e-10;18!CL:0000789;2.20e-10;18!CL:0002419;2.20e-10;18!CL:0000625;7.86e-08;11!CL:0000084;7.13e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.04e-10,18;CL:0000789,2.04e-10,18;CL:0002420,2.04e-10,18;CL:0002419,2.04e-10,18;CL:0000790,2.04e-10,18;CL:0000738,2.82e-09,136;CL:0002031,5.03e-09,120;CL:0002087,1.02e-08,115;CL:0000625,5.75e-08,11;CL:0000037,3.64e-07,168;CL:0000084,6.55e-07,25;CL:0000827,6.55e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.20e-10;18!UBERON:0008947;5.90e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.91e-16!115;UBERON:0002390!6.69e-10!102;UBERON:0003061!6.69e-10!102;UBERON:0002193!1.30e-09!112;UBERON:0002371!3.37e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.50e-09,118;UBERON:0007023,1.13e-08,114;UBERON:0002193,2.21e-08,108;UBERON:0002390,2.35e-08,98;UBERON:0003061,2.35e-08,98;UBERON:0001007,4.89e-07,145;UBERON:0001555,4.89e-07,145;UBERON:0007026,4.89e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0.491467873003018,0,0.436882744260345,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.764134057479513,1.06730766284929,1.33808328233255,1.18009283054671,1.15148819429164,2.47705797305722,0,0,1.84877005083394,0.0774672005803016,0,1.76160263600908,2.76997704265939,3.20871115952227,3.25516306073778,7.83704159839735,6.15397965436061,7.46969146139141,1.45398238779565,0.755751887377619,1.69808842831471,0.929716147622738,0,0.309706370895104,0.863077176966451,1.7931249457037,0.47296445977717,0.689491361473237,1.29096936716765,0,0.564727018627814,1.36453075028923,0,0.612167784741805,0.320929027076094,1.27867425159808,0.989553900560148,0.398927315243264,1.27867425159808,2.03146467040009,1.13477044938228,0.622822248995575,2.26123798731069,0.521482918420201,0.217188844705117,0,1.10483290796269,1.26584954976354,2.74631872205524,3.4016687994407,3.77385561915077,2.47122988522289,2.4028302854641,3.69668849403284,5.70025487482497,3.9783335439818,3.28795476776341,0,0,0.889509253863555,0,0.800791974072025,1.72425731986345,0,0,1.1384259382189,0.587237189370939,1.52909291250092,9.25199300053181,1.12101712596307,3.95076127162616,3.34406609193516,3.53709686474248,7.19605246498282,5.3499678525017,4.23698946623668,5.6813736688168,5.84480185223734,6.01616467179937,5.59751224202191,4.87374568083967,6.49929273036037,8.71020974134591,9.88451041455075,6.41307827954337,8.0141505157896,5.506258628966,5.04174314751005,8.82884732696053,7.31748666634838,4.30575502250752,3.44898444241729,5.15441168223945,6.32549230048757,7.64556994377832,3.90650072313851,4.75226022224187,5.27012916772205,6.2713439465665,7.49584359314075,4.97232229292435,2.46338399076314,3.83052812126992,1.60464117470104,4.05508330871837,0,0,0,2.1686349143074,1.00267582127178,0.434539556882471,0,0.973269740605272,0.189069634328136,0.443458794925128,0.351339142772504,6.09052701064364,0,0.741568885568859,1.9472843619281,1.56716763569341,1.19662164466979,0.476981248610684,0,0.371457501329565,0.79504962946682,0,1.04142150482278,0,0,0.825354125820202,0.208994966536811,1.29208379584664,1.06729878806013,1.00416183829401,0.402829317109147,0,0,0.367663080345869,0,1.42879565254528,2.91888184414021,1.0135033243499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,4.49565840151407,4.88895601226495,3.61516544825223,4.41175890929576,4.57546832594053,4.50814176311084,3.7752766284846,3.13954344200554,3.46272441251751,0,0,1.2347220339942,0,6.33775174109154,4.91413608338813,9.45263850690247,0,3.68965315629341,0,0.109750285408626,1.1240175325762,0.201057944823262,0.370353780634118,0,0,0,0,0.117408694235822,0.144366447761074,0,0,3.95102198979638,8.58486162094873,1.72351904261178,1.40402559083543,3.71577905721821,0,0.503946384596579,0,0,0,0,0.985326475791887,8.18850436323002,10.7810620081201,9.22367701868553,10.8568492746687,0.063497894292169,1.90994212779139,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0.99972991182057,6.08118903205952,13.0586843772353,0,0,0,0,0,0,0,0,3.34952292343276,4.9594342217689,7.05886699538616,0,0,0,0.167516265334349,0,0,0,1.24324654030811,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,3.10152039184331,4.09856981555372,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0.460404944679482,0,0,0,2.70719767744447,1.69433741629712,1.56869953835371,5.84556898613043,1.26661954671451,1.13733384070897,0.850468526382578,0.431831832204279,6.16909010761157,1.35473218771926,2.50844886927427,3.56826782263054,4.15538004464362,0.895499018888713,0,0,0,0,0.325378394664303,1.854738209659,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.330569830721956,0.960950336825531,0.382838137483752,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0,0,0,0.0962221127255121,0.670302275535787,0,1.60044461320525,0.43050537267123,0,0,0,1.01489521846434,2.29391162142713,5.69647187174163,3.81170840732462,5.34770955012053,3.8908398671563,3.7802200606668,3.17250070517708,0,0,0,0,1.58696134274089,0.355709216742071,0,0,0.191505370132367,0,2.27235358192189,1.40398589056729,0,0.156679895773023,2.50634477090067,0,0,0,4.68430861459359,0,0.307240764308458,0.447352215784832,0,0,0.278406173895242,0,0,0,0,25.4511134955179,4.24873719888493,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0.703347082052564,0.445234820091624,0,0,3.78571177677032,5.52567831062295,3.52705846995986,0,0,0,0,7.33986816169998,1.02314474045374,1.28236427328014,2.3948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| ||
|short_description=p5@SARM1 | |||
}} | }} |
Latest revision as of 05:48, 19 September 2015
Short description: | p5@SARM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SARM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_uc002hbe.1_5end |
EntrezGene: | SARM1 |
HGNC: | 17074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-10 | 18 |
alpha-beta T cell | 2.04e-10 | 18 |
immature T cell | 2.04e-10 | 18 |
mature T cell | 2.04e-10 | 18 |
immature alpha-beta T cell | 2.04e-10 | 18 |
leukocyte | 2.82e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.03e-09 | 120 |
nongranular leukocyte | 1.02e-08 | 115 |
CD8-positive, alpha-beta T cell | 5.75e-08 | 11 |
hematopoietic stem cell | 3.64e-07 | 168 |
T cell | 6.55e-07 | 25 |
pro-T cell | 6.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.50e-09 | 118 |
adult organism | 1.13e-08 | 114 |
hemolymphoid system | 2.21e-08 | 108 |
hematopoietic system | 2.35e-08 | 98 |
blood island | 2.35e-08 | 98 |
digestive system | 4.89e-07 | 145 |
digestive tract | 4.89e-07 | 145 |
primitive gut | 4.89e-07 | 145 |