FFCP PHASE1:Hg19::chr8:8244141..8244155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157285 | |EntrezGene=157285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E5RFL5 | |UniProt=E5RFL5 | ||
|association_with_transcript=-133bp_to_ENST00000520004_5end | |association_with_transcript=-133bp_to_ENST00000520004_5end | ||
|cluster_id=chr8:8244141..8244155,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_8_at_SGK223_5end | |description=CAGE_peak_8_at_SGK223_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!6.12e-11!5 | |ontology_enrichment_celltype=CL:0002322!6.12e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.81e-40;1!CL:0000632;1.71e-14;3!CL:0000327;1.24e-11;15!CL:0000138;5.54e-08;6 | |ontology_enrichment_celltype_v019=CL:0000222;1.81e-40;1!CL:0000632;1.71e-14;3!CL:0000327;1.24e-11;15!CL:0000138;5.54e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.83e-14,3;CL:0000327,1.27e-11,15;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.71e-14;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.71e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0002037;6.55e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0002037;6.55e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6 | |||
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| ||
|short_description=p8@SGK223 | |short_description=p8@SGK223 | ||
}} | }} |
Latest revision as of 06:19, 19 September 2015
Short description: | p8@SGK223 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SGK223_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -133bp_to_ENST00000520004_5end |
EntrezGene: | SGK223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.83e-14 | 3 |
extracellular matrix secreting cell | 1.27e-11 | 15 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |