FFCP PHASE1:Hg19::chr17:26902537..26902548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=230 | |EntrezGene=230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=418 | |HGNC=418 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=383bp_to_ENST00000460201_5end | |association_with_transcript=383bp_to_ENST00000460201_5end | ||
|cluster_id=chr17:26902537..26902548,- | |||
|coexpression_cluster_id=C787 | |coexpression_cluster_id=C787 | ||
|description=CAGE_peak_3_at_ALDOC_5end | |description=CAGE_peak_3_at_ALDOC_5end | ||
Latest revision as of 06:25, 19 September 2015
| Short description: | p3@ALDOC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ALDOC_5end |
| Coexpression cluster: | C787_cerebellum_pons_locus_brain_medulla_paracentral_temporal |
| Association with transcript: | 383bp_to_ENST00000460201_5end |
| EntrezGene: | ALDOC |
| HGNC: | 418 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p3@ALDOC |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 2.32e-65 | 15 |
| chordal neural plate | 2.32e-65 | 15 |
| segmental subdivision of hindbrain | 1.45e-52 | 12 |
| hindbrain | 1.45e-52 | 12 |
| presumptive hindbrain | 1.45e-52 | 12 |
| segmental subdivision of nervous system | 1.82e-48 | 13 |
| neural tube | 2.47e-42 | 56 |
| neural rod | 2.47e-42 | 56 |
| future spinal cord | 2.47e-42 | 56 |
| neural keel | 2.47e-42 | 56 |
Showing 1 to 10 of 59 entries
