Personal tools

FFCP PHASE1:Hg19::chr11:64897765..64897781,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=84447
|EntrezGene=84447
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=20738
|HGNC=20738
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-4bp_to_ENST00000527765_5end
|association_with_transcript=-4bp_to_ENST00000527765_5end
|cluster_id=chr11:64897765..64897781,-
|description=CAGE_peak_19_at_SYVN1_5end
|description=CAGE_peak_19_at_SYVN1_5end
|id=chr11:64897765..64897781,-
|id=chr11:64897765..64897781,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000775;3.48e-23;3!CL:0000047;1.38e-09;2!CL:0000094;2.60e-09;8!CL:0000081;5.23e-07;11!CL:0002567;8.38e-07;3
|ontology_enrichment_celltype_v019_2=CL:0000775,2.63e-23,3;CL:0000094,2.35e-09,8;CL:0000081,4.85e-07,11;CL:0002567,6.88e-07,3
|ontology_enrichment_development_v019=UBERON:0005425;8.01e-18;1!UBERON:0003056;8.38e-07;3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2
|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2
|ontology_enrichment_uberon=UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0000161!6.00e-08!35;UBERON:0001007!5.33e-07!155;UBERON:0001555!5.33e-07!155;UBERON:0007026!5.33e-07!155
|ontology_enrichment_uberon_v019=UBERON:0000029;8.01e-18;1!UBERON:0000941;8.01e-18;1!UBERON:0002171;8.01e-18;1!UBERON:0001785;8.01e-18;1!UBERON:0002464;8.01e-18;1!UBERON:0004904;8.01e-18;1!UBERON:0001021;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0003714;1.38e-09;2!UBERON:0005162;1.38e-09;2!UBERON:0000122;1.38e-09;2!UBERON:0002106;8.38e-07;3
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.23e-18,1;UBERON:0006518,6.23e-18,1;UBERON:0008949,6.23e-18,1;UBERON:0000101,6.23e-18,1;UBERON:0002167,6.23e-18,1;UBERON:0000029,8.72e-18,1;UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,1.90994212779139,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,1.27047312111232,0,0,0,0,0,2.99161459204025,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0.215714200818617,0,0.909382714338778,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0.710246901252508,0.328508624055237,0,0.116210378459959,0.846016147141356,0.200506470303285,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0.269272933229316,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.387956065953678,0.176512253383001,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0.39961921916426,0,0,0,0.14405479798815,0.248505071130865,0.235694034616795,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0.157611414598396,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,3.95691030930823,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0,1.65695622138878,1.48849806543585,0,0,0,0,0.2506898940227,0,0,0.628216385000937,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.785181748008205,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.300841313397029,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.214429632529969,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0.098150233615243,0.365753774946808,0,0.410651227424988,0,0,0,0.198950775161368,0,0.11294608203896,0.109940516745429,0,0.385870790539723,0,0.470317296361523,0,0.235676547101626,0,0.297046400327086,0,0,1.03382309777839,0.386747327841463,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0.506794004045748,0.203977659483963,0,0,0,0.606229585745915,0,0,0.103432995861895,0,0,0.387533459016037,0.186224142887574,0.112131862580613,0.381882949668989,0.202117188958219,0.217716747896961,0,0.26940821205835,0.358611026963382,0,0.244209805832924,0,1.9307228228694,0.179650404213174,0,0,0,0,0.805095174364105,0
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,1.90994212779139,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,1.27047312111232,0,0,0,0,0,2.99161459204025,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0.215714200818617,0,0.909382714338778,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0.710246901252508,0.328508624055237,0,0.116210378459959,0.846016147141356,0.200506470303285,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0.269272933229316,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.387956065953678,0.176512253383001,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0.39961921916426,0,0,0,0.14405479798815,0.248505071130865,0.235694034616795,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0.157611414598396,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,3.95691030930823,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0,1.65695622138878,1.48849806543585,0,0,0,0,0.2506898940227,0,0,0.628216385000937,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.785181748008205,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.300841313397029,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.214429632529969,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0.098150233615243,0.365753774946808,0,0.410651227424988,0,0,0,0.198950775161368,0,0.11294608203896,0.109940516745429,0,0.385870790539723,0,0.470317296361523,0,0.235676547101626,0,0.297046400327086,0,0,1.03382309777839,0.386747327841463,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0.506794004045748,0.203977659483963,0,0,0,0.606229585745915,0,0,0.103432995861895,0,0,0.387533459016037,0.186224142887574,0.112131862580613,0.381882949668989,0.202117188958219,0.217716747896961,0,0.26940821205835,0.358611026963382,0,0.244209805832924,0,1.9307228228694,0.179650404213174,0,0,0,0,0.805095174364105,0
|short_description=p19@SYVN1
|short_description=p19@SYVN1
}}
}}

Latest revision as of 06:28, 19 September 2015

Short description:p19@SYVN1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_19_at_SYVN1_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_ENST00000527765_5end
EntrezGene:SYVN1
HGNC: 20738
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data