FFCP PHASE1:Hg19::chr15:78423890..78423907,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24579 | |||
|TSSclassifier=strong | |||
|UniProt=O75838 | |||
|association_with_transcript=-4bp_to_ENST00000258930_5end | |||
|cluster_id=chr15:78423890..78423907,- | |||
|description=CAGE_peak_4_at_CIB2_5end | |||
|id=chr15:78423890..78423907,- | |||
|ontology_enrichment_celltype=CL:0000133!6.23e-12!59;CL:0002319!2.34e-10!25;CL:0000221!7.56e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.17e-19;25!CL:0000128;1.57e-15;7!CL:0000126;1.57e-15;7!CL:0000127;1.57e-15;7!CL:0002322;1.78e-12;5!CL:0000540;2.23e-10;6!CL:0000404;2.23e-10;6!CL:0000095;2.91e-10;17!CL:0002603;4.42e-08;3!CL:0000243;1.99e-07;15!CL:0000125;1.99e-07;15!CL:0002605;2.88e-07;3!CL:0002321;4.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.57e-19,25;CL:0000133,5.49e-16,59;CL:0000128,1.66e-15,7;CL:0000126,1.66e-15,7;CL:0000127,1.66e-15,7;CL:0002453,1.66e-15,7;CL:0002322,1.70e-12,5;CL:0000221,4.66e-12,72;CL:0000047,4.11e-11,8;CL:0000540,1.68e-10,6;CL:0000031,1.68e-10,6;CL:0000404,1.68e-10,6;CL:0000095,3.09e-10,17;CL:0000123,3.09e-10,17;CL:0000333,4.53e-10,41;CL:0002603,7.47e-08,3;CL:0002605,1.12e-07,3;CL:0000243,1.93e-07,15;CL:0000125,1.93e-07,15;CL:0000030,1.93e-07,15;CL:0000339,1.93e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;2.23e-10;6!CL:0000133;1.25e-08;59!UBERON:0009117;3.02e-08;10!UBERON:0005564;3.02e-08;10!CL:0000339;1.99e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.38e-07;22!DOID:2994;3.38e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.66e-07,22;DOID:2994,2.66e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.06e-11!94;UBERON:0001016!2.06e-11!94;UBERON:0005743!2.40e-10!86;UBERON:0000924!3.67e-09!173;UBERON:0006601!3.67e-09!173;UBERON:0001017!3.90e-09!82;UBERON:0004121!7.09e-09!169;UBERON:0002346!9.01e-09!90;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.28e-08;49!UBERON:0000473;2.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.47e-07,8;UBERON:0001016,4.53e-07,89 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0,0,0,2.09340350391728,1.09220686065086,1.05506791291381,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0.487932798790507,2.70866327768933,1.02000345622126,3.13454721478088,1.71741592278634,1.36874425072884,1.88313959392204,0.534893840235659,0.410502947249729,0.550975469195755,0,0.383829398097213,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.511450247374121,0.722878304769133,0,0,0,0,0.567208902984407,1.10864698731282,1.14185221401064,1.83370705696798,0,0,0,0,0,1.66943437013739,0,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.245668634623536,0,0,0,0.910161361938026,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0.67824236924195,0.193260853163297,0,0,2.07355300420312,1.85541675650079,2.09149097165133,3.21349270547648,2.01856680700503,3.6497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.439001141634502,0,0,0,0.325808305310325,0,0,1.85488647960123,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,1.52795370223311,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0.224262168690721,1.74384027533312,0.2933531432838,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.784596007954691,0,0,0.256686072559497,0.508189248444927,3.90419561572865,1.54657762555539,4.52293916402742,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0.921845842708516,0.0868836144680828,0.979005787313703,1.71571711905428,0.206768026122887,0,0,0.909382714338778,0,4.23346410661552,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.231046011313244,3.13739907670742,0,0.633309773357254,0,0,0.215915916102139,3.08454505380579,1.35473218771926,0.501689773854853,0.764628819135115,0,1.34324852833307,0,0,0.769350375349168,0.984043937099117,0.976135183992909,0.103041011647722,0.54941678891006,0.495056999523528,0.574265537996172,0,0,0.290012154876366,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.255679882248303,0.445160178233687,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0.699869440489966,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,2.13648142254946,3.84991942105343,0,0,0,0.497992903438899,1.11598390910176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27673408723686,0,0,0,0.890894042497916,0,0,0.422008249231538,0,0,1.68900326502395,0.19924798825107,0.276283915531148,0.503865495708552,1.02268682502155,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,7.98455192004777,0,0,0,0,0,0,1.03423011972439,0,3.47249989866585,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0,0.341826167541004,0.922255617552241,0.179515288819544,1.3037684630641,0,0.366390373607449,0,0,0,0,0,0.392125068635479,0.671286347903371,0,0.158936578980379,0.421996129056054,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.247127877893006,0,0.202203398942031,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,3.67287313956588,0.126373159256976,0.751617097072463,1.45163467956146,0,0.330991955875499,0.627865836814451,0,0,0.277349346026277,0.867798691675654,0.0979923974143777,0,0.17472666824203,0.51595809741485,0,0,0.164230914106418,0.0969890164884194,1.85337866052151,2.03382666702479,0,0.19871461170299,0.443175571691151,0.391102765469606,0.160317640503067,0,0.19980960958213,0.144090417154106,1.25990255782507,0.686379991447858,0,1.11827282008889,0.471388069233591,0.271808412147228,0.418411385249333,0,0.866851769704557,0,0,0,0.429765441419957,0,0.837847203816763,0.22916042401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| |||
|short_description=p4@CIB2 | |||
}} |
Latest revision as of 06:37, 19 September 2015
Short description: | p4@CIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000258930_5end |
EntrezGene: | CIB2 |
HGNC: | 24579 |
UniProt: | O75838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.57e-19 | 25 |
neurectodermal cell | 5.49e-16 | 59 |
oligodendrocyte | 1.66e-15 | 7 |
macroglial cell | 1.66e-15 | 7 |
astrocyte | 1.66e-15 | 7 |
oligodendrocyte precursor cell | 1.66e-15 | 7 |
embryonic stem cell | 1.70e-12 | 5 |
ectodermal cell | 4.66e-12 | 72 |
neuronal stem cell | 4.11e-11 | 8 |
neuron | 1.68e-10 | 6 |
neuroblast | 1.68e-10 | 6 |
electrically signaling cell | 1.68e-10 | 6 |
neuron associated cell | 3.09e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.09e-10 | 17 |
migratory neural crest cell | 4.53e-10 | 41 |
astrocyte of the cerebellum | 7.47e-08 | 3 |
astrocyte of the cerebral cortex | 1.12e-07 | 3 |
glial cell (sensu Vertebrata) | 1.93e-07 | 15 |
glial cell | 1.93e-07 | 15 |
glioblast | 1.93e-07 | 15 |
glioblast (sensu Vertebrata) | 1.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
testis | 1.47e-07 | 8 |
nervous system | 4.53e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.66e-07 | 22 |
germ cell cancer | 2.66e-07 | 22 |