FFCP PHASE1:Hg19::chr6:54173227..54173264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27283 | |EntrezGene=27283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14599 | |HGNC=14599 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJW2 | |UniProt=Q9UJW2 | ||
|association_with_transcript=0bp_to_ENST00000259782_5end | |||
|cluster_id=chr6:54173227..54173264,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_TINAG_5end | |||
|id=chr6:54173227..54173264,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.46e-17!18;CL:0002518!1.46e-17!18;CL:1000507!1.32e-16!12;CL:1000494!1.32e-16!12;CL:0000239!2.10e-13!3;CL:1000615!2.10e-13!3;CL:0002306!2.10e-13!3;CL:1000449!3.27e-12!16;CL:0002681!5.98e-08!13;CL:0002584!5.98e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.51e-28;10!CL:1000494;2.51e-28;10!CL:1000497;9.90e-27;17!CL:0002518;9.90e-27;17!CL:1000449;1.26e-18;15!CL:0000239;2.56e-18;3!CL:1000615;2.56e-18;3!CL:0002306;2.56e-18;3!CL:0002681;3.71e-12;12!CL:0002584;3.71e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.36e-28,10;CL:1000494,2.36e-28,10;CL:1000497,1.02e-26,17;CL:0002518,1.02e-26,17;CL:1000449,1.21e-18,15;CL:0000239,2.20e-18,3;CL:1000615,2.20e-18,3;CL:0002306,2.20e-18,3;CL:0002681,3.71e-12,12;CL:0002584,3.71e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.14e-10;10!UBERON:0007687;5.14e-10;10!UBERON:0001045;2.21e-07;1!UBERON:0006242;4.21e-07;1 | |||
|ontology_enrichment_disease=DOID:4468!1.45e-09!2;DOID:299!1.64e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.38e-17!27;UBERON:0003918!4.38e-17!27;UBERON:0005095!4.38e-17!27;UBERON:0007687!4.38e-17!27;UBERON:0009773!1.32e-16!12;UBERON:0001231!1.32e-16!12;UBERON:0004810!1.32e-16!12;UBERON:0000489!4.65e-14!32;UBERON:0005172!5.96e-14!55;UBERON:0005173!5.96e-14!55;UBERON:0006853!2.10e-13!3;UBERON:0007685!2.10e-13!3;UBERON:0004134!2.10e-13!3;UBERON:0002417!3.01e-12!61;UBERON:0000916!3.01e-12!61;UBERON:0004211!3.27e-12!16;UBERON:0001285!3.27e-12!16;UBERON:0007684!3.27e-12!16;UBERON:0003220!3.27e-12!16;UBERON:0004208!3.27e-12!16;UBERON:0001155!7.33e-12!9;UBERON:0006554!1.79e-11!44;UBERON:0006555!1.95e-11!17;UBERON:0005103!1.95e-11!17;UBERON:0000083!1.95e-11!17;UBERON:0009201!1.95e-11!17;UBERON:0004819!1.95e-11!17;UBERON:0006553!1.95e-11!17;UBERON:0003074!1.95e-11!17;UBERON:0003060!1.95e-11!17;UBERON:0001008!3.67e-11!45;UBERON:0000160!4.77e-11!27;UBERON:0000080!9.56e-11!18;UBERON:0002120!9.56e-11!18;UBERON:0004875!9.56e-11!18;UBERON:0005721!9.56e-11!18;UBERON:0005754!9.56e-11!18;UBERON:0007297!9.56e-11!18;UBERON:0005409!3.54e-10!35;UBERON:0000059!1.19e-09!11;UBERON:0004876!1.42e-09!20;UBERON:0000058!2.77e-09!26;UBERON:0003887!4.52e-09!21;UBERON:0005177!1.36e-08!107;UBERON:0001225!5.98e-08!13;UBERON:0008987!5.98e-08!13;UBERON:0003103!1.30e-07!69;UBERON:0004921!2.99e-07!129;UBERON:0004185!2.99e-07!129;UBERON:0009569!6.51e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.51e-28;10!UBERON:0009773;2.51e-28;10!UBERON:0001231;2.51e-28;10!UBERON:0004810;2.51e-28;10!UBERON:0002113;3.21e-28;24!UBERON:0011143;3.21e-28;24!UBERON:0000489;5.21e-23;29!UBERON:0006554;3.55e-22;30!UBERON:0001008;3.55e-22;30!UBERON:0006555;1.26e-18;15!UBERON:0004819;1.26e-18;15!UBERON:0001285;1.26e-18;15!UBERON:0007684;1.26e-18;15!UBERON:0006853;2.56e-18;3!UBERON:0007685;2.56e-18;3!UBERON:0004134;2.56e-18;3!UBERON:0000160;4.94e-16;17!UBERON:0005409;5.47e-16;22!UBERON:0001225;3.71e-12;12!UBERON:0008987;3.71e-12;12!UBERON:0002108;7.08e-12;4!UBERON:0001155;3.78e-11;9!UBERON:0005172;8.55e-11;52!UBERON:0005173;8.55e-11;52!UBERON:0001851;1.09e-09;15!UBERON:0000353;1.09e-09;15!UBERON:0000059;3.84e-09;11!UBERON:0004921;3.97e-09;33!UBERON:0002417;5.53e-08;58!UBERON:0000916;5.53e-08;58!UBERON:0001154;2.21e-07;1!UBERON:0001153;2.21e-07;1!UBERON:0009854;2.21e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.36e-28,10;UBERON:0002113,6.86e-26,26;UBERON:0003918,6.86e-26,26;UBERON:0011143,6.86e-26,26;UBERON:0005095,6.86e-26,26;UBERON:0007687,6.86e-26,26;UBERON:0000489,2.16e-21,31;UBERON:0004211,1.21e-18,15;UBERON:0009773,1.21e-18,15;UBERON:0001231,1.21e-18,15;UBERON:0001285,1.21e-18,15;UBERON:0007684,1.21e-18,15;UBERON:0004208,1.21e-18,15;UBERON:0006853,2.20e-18,3;UBERON:0007685,2.20e-18,3;UBERON:0004134,2.20e-18,3;UBERON:0006555,1.98e-17,16;UBERON:0004819,1.98e-17,16;UBERON:0005172,3.18e-16,54;UBERON:0005173,3.18e-16,54;UBERON:0000160,4.66e-16,17;UBERON:0002417,2.39e-14,60;UBERON:0000916,2.39e-14,60;UBERON:0005409,5.04e-14,25;UBERON:0006554,2.00e-13,47;UBERON:0001008,4.18e-13,48;UBERON:0001225,3.71e-12,12;UBERON:0008987,3.71e-12,12;UBERON:0002108,6.70e-12,4;UBERON:0001155,3.68e-11,9;UBERON:0001851,1.09e-09,15;UBERON:0000353,1.09e-09,15;UBERON:0000059,3.76e-09,11;UBERON:0005177,7.57e-09,101;UBERON:0003103,1.14e-08,68;UBERON:0001154,2.21e-07,1;UBERON:0001153,2.21e-07,1;UBERON:0001045,2.21e-07,1 | |||
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| ||
|short_description=p1@TINAG | |||
}} | }} |
Latest revision as of 08:16, 19 September 2015
Short description: | p1@TINAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TINAG_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000259782_5end |
EntrezGene: | TINAG |
HGNC: | 14599 |
UniProt: | Q9UJW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.36e-28 | 10 |
nephron tubule epithelial cell | 2.36e-28 | 10 |
kidney cell | 1.02e-26 | 17 |
kidney epithelial cell | 1.02e-26 | 17 |
epithelial cell of nephron | 1.21e-18 | 15 |
brush border epithelial cell | 2.20e-18 | 3 |
kidney cortex tubule cell | 2.20e-18 | 3 |
epithelial cell of proximal tubule | 2.20e-18 | 3 |
kidney cortical cell | 3.71e-12 | 12 |
renal cortical epithelial cell | 3.71e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.36e-28 | 10 |
kidney | 6.86e-26 | 26 |
kidney mesenchyme | 6.86e-26 | 26 |
upper urinary tract | 6.86e-26 | 26 |
kidney rudiment | 6.86e-26 | 26 |
kidney field | 6.86e-26 | 26 |
cavitated compound organ | 2.16e-21 | 31 |
nephron epithelium | 1.21e-18 | 15 |
renal tubule | 1.21e-18 | 15 |
nephron tubule | 1.21e-18 | 15 |
nephron | 1.21e-18 | 15 |
uriniferous tubule | 1.21e-18 | 15 |
nephrogenic mesenchyme | 1.21e-18 | 15 |
renal cortex tubule | 2.20e-18 | 3 |
region of nephron tubule | 2.20e-18 | 3 |
proximal tubule | 2.20e-18 | 3 |
excretory tube | 1.98e-17 | 16 |
kidney epithelium | 1.98e-17 | 16 |
abdomen element | 3.18e-16 | 54 |
abdominal segment element | 3.18e-16 | 54 |
intestine | 4.66e-16 | 17 |
abdominal segment of trunk | 2.39e-14 | 60 |
abdomen | 2.39e-14 | 60 |
gastrointestinal system | 5.04e-14 | 25 |
urinary system structure | 2.00e-13 | 47 |
renal system | 4.18e-13 | 48 |
cortex of kidney | 3.71e-12 | 12 |
renal parenchyma | 3.71e-12 | 12 |
small intestine | 6.70e-12 | 4 |
colon | 3.68e-11 | 9 |
cortex | 1.09e-09 | 15 |
parenchyma | 1.09e-09 | 15 |
large intestine | 3.76e-09 | 11 |
trunk region element | 7.57e-09 | 101 |
compound organ | 1.14e-08 | 68 |
vermiform appendix | 2.21e-07 | 1 |
caecum | 2.21e-07 | 1 |
midgut | 2.21e-07 | 1 |