FFCP PHASE1:Hg19::chr8:91803695..91803706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64168 | |EntrezGene=64168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20983 | |HGNC=20983 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N987 | |UniProt=Q8N987 | ||
|association_with_transcript=-71bp_to_ENST00000417640_5end | |association_with_transcript=-71bp_to_ENST00000417640_5end | ||
|cluster_id=chr8:91803695..91803706,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_7_at_NECAB1_5end | |description=CAGE_peak_7_at_NECAB1_5end | ||
|id=chr8:91803695..91803706,+ | |id=chr8:91803695..91803706,+ | ||
|ontology_enrichment_celltype=CL:0002322;1.63e-90;5!CL:0002321;2.02e-30;15!CL:0000148;5.40e-17;10!CL:0000147;2.48e-12;14!CL:0000710;8.19e-09;20 | |ontology_enrichment_celltype=CL:0002322!3.79e-23!5;CL:0000540!5.15e-07!6;CL:0000031!5.15e-07!6;CL:0000404!5.15e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;1.63e-90;5!CL:0002321;2.02e-30;15!CL:0000148;5.40e-17;10!CL:0000147;2.48e-12;14!CL:0000710;8.19e-09;20 | ||
|ontology_enrichment_disease=DOID:5093;8.49e-19;4!DOID:1612;8.49e-19;4 | |ontology_enrichment_celltype_v019_2=CL:0002322,2.15e-90,5;CL:0000148,5.86e-17,10;CL:0000541,5.86e-17,10;CL:0000147,2.63e-12,14;CL:0000710,8.52e-09,20 | ||
|ontology_enrichment_uberon=UBERON:0001874;4.69e-19;1!UBERON:0000922;1.03e-08;49!UBERON:0000310;4.26e-08;10!UBERON:0001443;1.93e-07;11!UBERON:0005383;3.15e-07;3!UBERON:0005382;3.15e-07;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!1.34e-10!4;DOID:1612!1.34e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.49e-19;4!DOID:1612;8.49e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.11e-19,4;DOID:1612,8.11e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.69e-47!34;UBERON:0001869!9.82e-46!32;UBERON:0002791!3.10e-44!33;UBERON:0002020!6.81e-43!34;UBERON:0003528!6.81e-43!34;UBERON:0002619!7.83e-43!22;UBERON:0002780!1.04e-42!41;UBERON:0001890!1.04e-42!41;UBERON:0006240!1.04e-42!41;UBERON:0003080!1.36e-41!42;UBERON:0001950!2.90e-41!20;UBERON:0000956!1.88e-37!25;UBERON:0000203!1.88e-37!25;UBERON:0005743!1.56e-35!86;UBERON:0001049!1.73e-35!57;UBERON:0005068!1.73e-35!57;UBERON:0006241!1.73e-35!57;UBERON:0007135!1.73e-35!57;UBERON:0001017!8.62e-35!82;UBERON:0002616!4.12e-34!59;UBERON:0000073!1.40e-31!94;UBERON:0001016!1.40e-31!94;UBERON:0000955!1.53e-30!69;UBERON:0006238!1.53e-30!69;UBERON:0003056!5.08e-30!61;UBERON:0003075!5.38e-26!86;UBERON:0007284!5.38e-26!86;UBERON:0001871!9.83e-25!7;UBERON:0002346!1.40e-24!90;UBERON:0000200!3.56e-24!6;UBERON:0007023!4.52e-18!115;UBERON:0000033!2.87e-16!123;UBERON:0000153!3.02e-15!129;UBERON:0007811!3.02e-15!129;UBERON:0004121!9.15e-15!169;UBERON:0000924!2.84e-14!173;UBERON:0006601!2.84e-14!173;UBERON:0000349!6.13e-14!5;UBERON:0002771!4.69e-13!3;UBERON:0002420!1.30e-11!9;UBERON:0007245!1.30e-11!9;UBERON:0010009!1.30e-11!9;UBERON:0010011!1.30e-11!9;UBERON:0000454!1.30e-11!9;UBERON:0000369!4.22e-10!4;UBERON:0002435!4.22e-10!4;UBERON:0000204!4.22e-10!4;UBERON:0010082!4.22e-10!4;UBERON:0001870!1.45e-09!2;UBERON:0001876!1.58e-09!2;UBERON:0001872!4.64e-08!5;UBERON:0002308!1.41e-07!9;UBERON:0000125!1.41e-07!9;UBERON:0000025!1.72e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;4.69e-19;1!UBERON:0000922;1.03e-08;49!UBERON:0000310;4.26e-08;10!UBERON:0001443;1.93e-07;11!UBERON:0005383;3.15e-07;3!UBERON:0005382;3.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,4.69e-19,1;UBERON:0000310,4.19e-08,10;UBERON:0001443,1.90e-07,11;UBERON:0005383,3.16e-07,3;UBERON:0005382,3.16e-07,3 | |||
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| ||
|short_description=p7@NECAB1 | |short_description=p7@NECAB1 | ||
}} | }} |
Latest revision as of 10:50, 19 September 2015
Short description: | p7@NECAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NECAB1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -71bp_to_ENST00000417640_5end |
EntrezGene: | NECAB1 |
HGNC: | 20983 |
UniProt: | Q8N987 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.15e-90 | 5 |
melanocyte | 5.86e-17 | 10 |
melanoblast | 5.86e-17 | 10 |
pigment cell | 2.63e-12 | 14 |
neurecto-epithelial cell | 8.52e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
putamen | 4.69e-19 | 1 |
breast | 4.19e-08 | 10 |
chest | 1.90e-07 | 11 |
caudate-putamen | 3.16e-07 | 3 |
dorsal striatum | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.11e-19 | 4 |
breast cancer | 8.11e-19 | 4 |