FFCP PHASE1:Hg19::chr7:73623717..73623733,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:73623717..73623733,+
|short_description=p4@LAT2
|description=CAGE_peak_4_at_LAT2_5end
|association_with_transcript=0bp_to_ENST00000344995_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7462 | |EntrezGene=7462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12749 | |HGNC=12749 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZY6 | |UniProt=Q9GZY6 | ||
|association_with_transcript=0bp_to_ENST00000344995_5end | |||
|cluster_id=chr7:73623717..73623733,+ | |||
|description=CAGE_peak_4_at_LAT2_5end | |||
|id=chr7:73623717..73623733,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.21e-48!172;CL:0000566!1.21e-48!172;CL:0002032!1.16e-44!165;CL:0000837!1.16e-44!165;CL:0000988!2.65e-44!182;CL:0000738!1.01e-36!140;CL:0002087!3.99e-33!119;CL:0002031!9.11e-33!124;CL:0000763!2.25e-32!112;CL:0000049!2.25e-32!112;CL:0000766!6.36e-24!76;CL:0000557!1.77e-23!71;CL:0000839!1.31e-22!70;CL:0002009!2.34e-20!65;CL:0002194!5.17e-20!63;CL:0000576!5.17e-20!63;CL:0000040!5.17e-20!63;CL:0000559!5.17e-20!63;CL:0002057!2.08e-19!42;CL:0000860!1.06e-18!45;CL:0000945!5.13e-16!24;CL:0000826!5.13e-16!24;CL:0002393!5.21e-12!9;CL:0002397!5.21e-12!9;CL:0000542!7.19e-11!53;CL:0000051!7.19e-11!53;CL:0000838!4.89e-10!52;CL:0000134!1.45e-09!358;CL:0002320!6.21e-09!365;CL:0000236!1.15e-07!14;CL:0000219!8.84e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.92e-23;5!CL:0000945;4.56e-22;24!CL:0000163;8.35e-13;9!CL:0002393;9.22e-11;6!CL:0002397;9.22e-11;6!CL:0000767;2.97e-10;3!CL:0000946;1.26e-08;1!CL:0000786;1.26e-08;1!CL:0000817;1.69e-08;1!CL:0000542;4.02e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.21e-22,5;CL:0002028,1.21e-22,5;CL:0000945,2.33e-22,24;CL:0000826,2.33e-22,24;CL:0000037,2.86e-21,168;CL:0002032,2.07e-20,161;CL:0000837,2.07e-20,161;CL:0000738,2.28e-20,136;CL:0000988,5.75e-20,177;CL:0002031,4.31e-15,120;CL:0000542,4.40e-14,53;CL:0000051,4.40e-14,53;CL:0000163,1.13e-12,9;CL:0000838,7.93e-12,52;CL:0000817,1.22e-10,3;CL:0002087,1.45e-10,115;CL:0000767,3.58e-10,3;CL:0000946,1.22e-08,1;CL:0000786,1.22e-08,1;CL:0000980,1.22e-08,1;CL:0000763,2.89e-08,108;CL:0000049,2.89e-08,108;CL:0000236,2.94e-08,14;CL:0000766,9.52e-08,72;CL:0000134,1.05e-07,354;CL:0002320,1.83e-07,361;CL:0002393,2.34e-07,9;CL:0002397,2.34e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;4.02e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!7.51e-13!51;DOID:0060083!7.51e-13!51;DOID:8692!2.47e-12!31;DOID:1240!2.75e-12!39 | |||
|ontology_enrichment_disease_v019=DOID:630;1.09e-08;1!DOID:0050177;1.09e-08;1!DOID:0050427;1.09e-08;1!DOID:12603;1.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.05e-08,1;DOID:0050177,1.05e-08,1;DOID:0050427,1.05e-08,1;DOID:12603,2.02e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.85e-25!102;UBERON:0003061!1.85e-25!102;UBERON:0002193!9.08e-24!112;UBERON:0002371!1.28e-20!80;UBERON:0001474!3.24e-18!86;UBERON:0002405!1.39e-15!115;UBERON:0004765!1.52e-13!101;UBERON:0001434!1.52e-13!101;UBERON:0002384!4.39e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.90e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.47781061009902,1.41679406364623,2.36018566109342,1.15148819429164,0.309632246632152,0,0,0,0.309868802321207,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.464858073811369,0,1.23882548358041,0.575384784644301,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.434377689410233,0.605399502633369,0,0,1.47878700418359,1.27562579979026,1.25795187305026,0.22465726229299,0.150176892841506,0.32145117339416,0.855038231223746,0.79566670879636,0.730656615058536,0,0.546138611262131,0.889509253863555,0.853460445133014,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,0,0,0,0,0,1.31692042387539,0,0,0,0.167186495390678,0,0,0,1.78256731016278,0.294605907474837,0,0.270803863765016,0.25618263945135,0.520237390239513,0.164437904603676,1.10540007114339,0.869409257205157,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,1.05658120815871,2.28060927094849,2.30591925467138,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,1.72502059887614,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,1.23408681925858,0,0,0,0,0,0,2.04383492638291,2.74111504655245,0,0,0.199579371432817,5.36215036370627,0.635020748171649,0,0.561594356226918,10.0423258774605,0.313359791546046,0,0.338583555603207,0.802940375518498,0.80719882876419,0,0.343505344755765,0.307240764308458,0,0.333698283423817,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0,0.182248669974074,0,0.157611414598396,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0.395223263795889,2.67943716437971,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,3.68748760178494,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.385870790539723,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.45120521581504,0.199882311849858,0,0.352894871715692,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,5.77023286145819 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.47781061009902,1.41679406364623,2.36018566109342,1.15148819429164,0.309632246632152,0,0,0,0.309868802321207,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.464858073811369,0,1.23882548358041,0.575384784644301,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.434377689410233,0.605399502633369,0,0,1.47878700418359,1.27562579979026,1.25795187305026,0.22465726229299,0.150176892841506,0.32145117339416,0.855038231223746,0.79566670879636,0.730656615058536,0,0.546138611262131,0.889509253863555,0.853460445133014,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,0,0,0,0,0,1.31692042387539,0,0,0,0.167186495390678,0,0,0,1.78256731016278,0.294605907474837,0,0.270803863765016,0.25618263945135,0.520237390239513,0.164437904603676,1.10540007114339,0.869409257205157,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,1.05658120815871,2.28060927094849,2.30591925467138,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,1.72502059887614,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,1.23408681925858,0,0,0,0,0,0,2.04383492638291,2.74111504655245,0,0,0.199579371432817,5.36215036370627,0.635020748171649,0,0.561594356226918,10.0423258774605,0.313359791546046,0,0.338583555603207,0.802940375518498,0.80719882876419,0,0.343505344755765,0.307240764308458,0,0.333698283423817,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0,0.182248669974074,0,0.157611414598396,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0.395223263795889,2.67943716437971,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,3.68748760178494,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.385870790539723,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.45120521581504,0.199882311849858,0,0.352894871715692,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,5.77023286145819 | ||
|short_description=p4@LAT2 | |||
}} | }} |
Latest revision as of 11:23, 19 September 2015
Short description: | p4@LAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344995_5end |
EntrezGene: | LAT2 |
HGNC: | 12749 |
UniProt: | Q9GZY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.21e-22 | 5 |
basophil mast progenitor cell | 1.21e-22 | 5 |
lymphocyte of B lineage | 2.33e-22 | 24 |
pro-B cell | 2.33e-22 | 24 |
hematopoietic stem cell | 2.86e-21 | 168 |
hematopoietic oligopotent progenitor cell | 2.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-20 | 161 |
leukocyte | 2.28e-20 | 136 |
hematopoietic cell | 5.75e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 4.31e-15 | 120 |
lymphocyte | 4.40e-14 | 53 |
common lymphoid progenitor | 4.40e-14 | 53 |
endocrine cell | 1.13e-12 | 9 |
lymphoid lineage restricted progenitor cell | 7.93e-12 | 52 |
precursor B cell | 1.22e-10 | 3 |
nongranular leukocyte | 1.45e-10 | 115 |
basophil | 3.58e-10 | 3 |
antibody secreting cell | 1.22e-08 | 1 |
plasma cell | 1.22e-08 | 1 |
plasmablast | 1.22e-08 | 1 |
myeloid cell | 2.89e-08 | 108 |
common myeloid progenitor | 2.89e-08 | 108 |
B cell | 2.94e-08 | 14 |
myeloid leukocyte | 9.52e-08 | 72 |
mesenchymal cell | 1.05e-07 | 354 |
connective tissue cell | 1.83e-07 | 361 |
intermediate monocyte | 2.34e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.90e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.05e-08 | 1 |
monogenic disease | 1.05e-08 | 1 |
xeroderma pigmentosum | 1.05e-08 | 1 |
acute leukemia | 2.02e-08 | 1 |