FFCP PHASE1:Hg19::chr11:65628190..65628230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80198 | |EntrezGene=80198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29814 | |HGNC=29814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000524647_5end | |association_with_transcript=-100bp_to_ENST00000524647_5end | ||
|cluster_id=chr11:65628190..65628230,+ | |||
|description=CAGE_peak_3_at_MUS81_5end | |description=CAGE_peak_3_at_MUS81_5end | ||
|id=chr11:65628190..65628230,+ | |id=chr11:65628190..65628230,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.34e-17!246;CL:0002321!4.00e-17!248;CL:0000066!2.90e-13!254;CL:0000055!6.31e-13!180;CL:0000012!2.42e-11!682;CL:0000548!3.28e-11!679;CL:0000004!3.28e-11!679;CL:0000255!3.28e-11!679;CL:0000144!5.69e-08!625;CL:0002076!1.02e-07!43;CL:0000057!1.52e-07!75;CL:0002368!1.80e-07!13;CL:0002371!4.03e-07!591;CL:0000223!5.73e-07!59 | |ontology_enrichment_celltype=CL:0000220!1.34e-17!246;CL:0002321!4.00e-17!248;CL:0000066!2.90e-13!254;CL:0000055!6.31e-13!180;CL:0000012!2.42e-11!682;CL:0000548!3.28e-11!679;CL:0000004!3.28e-11!679;CL:0000255!3.28e-11!679;CL:0000144!5.69e-08!625;CL:0002076!1.02e-07!43;CL:0000057!1.52e-07!75;CL:0002368!1.80e-07!13;CL:0002371!4.03e-07!591;CL:0000223!5.73e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.13e-08;13!CL:0002202;7.45e-07;9!CL:0002632;7.45e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.82e-15,250;CL:0000066,2.76e-11,253;CL:0002368,5.33e-08,13;CL:0000057,5.75e-07,76;CL:0000222,8.65e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.66e-15!216;UBERON:0003104!1.36e-13!238;UBERON:0009142!1.36e-13!238;UBERON:0005256!2.90e-11!143;UBERON:0000475!1.30e-09!365;UBERON:0000481!2.62e-09!347;UBERON:0004119!2.65e-08!169;UBERON:0000925!2.65e-08!169;UBERON:0006595!2.65e-08!169;UBERON:0003102!3.06e-08!95;UBERON:0009569!7.09e-08!113;UBERON:0000490!1.90e-07!138;UBERON:0000466!2.00e-07!126;UBERON:0003914!5.53e-07!118 | |ontology_enrichment_uberon=UBERON:0002100!5.66e-15!216;UBERON:0003104!1.36e-13!238;UBERON:0009142!1.36e-13!238;UBERON:0005256!2.90e-11!143;UBERON:0000475!1.30e-09!365;UBERON:0000481!2.62e-09!347;UBERON:0004119!2.65e-08!169;UBERON:0000925!2.65e-08!169;UBERON:0006595!2.65e-08!169;UBERON:0003102!3.06e-08!95;UBERON:0009569!7.09e-08!113;UBERON:0000490!1.90e-07!138;UBERON:0000466!2.00e-07!126;UBERON:0003914!5.53e-07!118 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.89e-15,199;UBERON:0003104,1.05e-10,160;UBERON:0009142,1.05e-10,160;UBERON:0005256,3.64e-10,122;UBERON:0000490,1.68e-08,148;UBERON:0004119,2.62e-07,160;UBERON:0000925,2.62e-07,160;UBERON:0006595,2.62e-07,160;UBERON:0009569,2.86e-07,112;UBERON:0007503,2.92e-07,78;UBERON:0003102,4.58e-07,99;UBERON:0007524,8.62e-07,73 | |||
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| ||
|short_description=p3@MUS81 | |short_description=p3@MUS81 | ||
}} | }} |
Latest revision as of 11:37, 19 September 2015
Short description: | p3@MUS81 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MUS81_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000524647_5end |
EntrezGene: | MUS81 |
HGNC: | 29814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.82e-15 | 250 |
epithelial cell | 2.76e-11 | 253 |
respiratory epithelial cell | 5.33e-08 | 13 |
fibroblast | 5.75e-07 | 76 |
mesodermal cell | 8.65e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.89e-15 | 199 |
mesenchyme | 1.05e-10 | 160 |
entire embryonic mesenchyme | 1.05e-10 | 160 |
trunk mesenchyme | 3.64e-10 | 122 |
unilaminar epithelium | 1.68e-08 | 148 |
endoderm-derived structure | 2.62e-07 | 160 |
endoderm | 2.62e-07 | 160 |
presumptive endoderm | 2.62e-07 | 160 |
subdivision of trunk | 2.86e-07 | 112 |
epithelial vesicle | 2.92e-07 | 78 |
surface structure | 4.58e-07 | 99 |
dense mesenchyme tissue | 8.62e-07 | 73 |