FFCP PHASE1:Hg19::chr1:84874085..84874144,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:84874085..84874144,+ to FFCP PHASE1:Hg19::chr1:84874085..84874144,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58511 | |EntrezGene=58511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28875 | |HGNC=28875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009wch.1_5end | |||
|cluster_id=chr1:84874085..84874144,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_DNASE2B_5end | |||
|id=chr1:84874085..84874144,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.87e-17!63;CL:0000576!1.87e-17!63;CL:0000040!1.87e-17!63;CL:0000559!1.87e-17!63;CL:0002009!9.21e-17!65;CL:0000839!3.34e-15!70;CL:0000557!6.44e-15!71;CL:0000766!1.33e-13!76;CL:0000235!2.09e-12!10;CL:0000148!1.21e-11!10;CL:0000541!1.21e-11!10;CL:0002619!4.29e-10!3;CL:0000763!1.23e-08!112;CL:0000049!1.23e-08!112;CL:0000147!4.17e-08!14;CL:0002087!6.05e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.57e-52;6!CL:0000148;5.12e-14;10!CL:0002567;1.26e-12;3!CL:0000147;4.53e-10;14!CL:0002566;5.30e-10;1!CL:0000473;3.04e-09;39!CL:0000234;3.04e-09;39!CL:0000710;4.30e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.68e-52,6;CL:0000148,4.94e-14,10;CL:0000541,4.94e-14,10;CL:0002567,1.33e-12,3;CL:0002194,2.03e-10,59;CL:0000576,2.03e-10,59;CL:0000040,2.03e-10,59;CL:0000559,2.03e-10,59;CL:0000147,4.43e-10,14;CL:0002009,4.84e-10,61;CL:0002566,4.85e-10,1;CL:0000839,3.39e-09,66;CL:0000557,4.83e-09,67;CL:0000766,2.46e-08,72;CL:0000473,3.43e-08,48;CL:0000234,3.43e-08,48;CL:0000710,4.23e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.71e-10;1!UBERON:0008801;4.44e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-13!115;UBERON:0002371!1.13e-12!80;UBERON:0001474!1.93e-11!86;UBERON:0004765!4.69e-10!101;UBERON:0001434!4.69e-10!101;UBERON:0002390!6.56e-10!102;UBERON:0003061!6.56e-10!102;UBERON:0002193!1.34e-09!112;UBERON:0002405!3.29e-09!115;UBERON:0001829!3.80e-08!2;UBERON:0000369!1.36e-07!4;UBERON:0002435!1.36e-07!4;UBERON:0000204!1.36e-07!4;UBERON:0010082!1.36e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.71e-18;2!UBERON:0001044;9.91e-14;6!UBERON:0003293;9.91e-14;6!UBERON:0003294;9.91e-14;6!UBERON:0010047;9.91e-14;6!UBERON:0003408;9.91e-14;6!UBERON:0000167;9.91e-14;6!UBERON:0002171;1.98e-10;1!UBERON:0006518;1.98e-10;1!UBERON:0008949;1.98e-10;1!UBERON:0000101;1.98e-10;1!UBERON:0002167;1.98e-10;1!UBERON:0001736;3.71e-10;1!UBERON:0001831;4.44e-10;1!UBERON:0001567;4.44e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.71e-18,2;UBERON:0001044,9.91e-14,6;UBERON:0003293,9.91e-14,6;UBERON:0003294,9.91e-14,6;UBERON:0010047,9.91e-14,6;UBERON:0000167,9.91e-14,6;UBERON:0002171,1.98e-10,1;UBERON:0006518,1.98e-10,1;UBERON:0008949,1.98e-10,1;UBERON:0000101,1.98e-10,1;UBERON:0002167,1.98e-10,1;UBERON:0001736,3.71e-10,1;UBERON:0006298,3.71e-10,1;UBERON:0001831,4.44e-10,1;UBERON:0001567,4.44e-10,1;UBERON:0008801,4.44e-10,1;UBERON:0003408,1.91e-08,10;UBERON:0002371,7.78e-08,76;UBERON:0001474,3.55e-07,82 | |||
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| ||
|short_description=p1@DNASE2B | |||
}} | }} |
Latest revision as of 12:03, 19 September 2015
Short description: | p1@DNASE2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNASE2B_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_uc009wch.1_5end |
EntrezGene: | DNASE2B |
HGNC: | 28875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.68e-52 | 6 |
melanocyte | 4.94e-14 | 10 |
melanoblast | 4.94e-14 | 10 |
light melanocyte | 1.33e-12 | 3 |
monopoietic cell | 2.03e-10 | 59 |
monocyte | 2.03e-10 | 59 |
monoblast | 2.03e-10 | 59 |
promonocyte | 2.03e-10 | 59 |
pigment cell | 4.43e-10 | 14 |
macrophage dendritic cell progenitor | 4.84e-10 | 61 |
dark melanocyte | 4.85e-10 | 1 |
myeloid lineage restricted progenitor cell | 3.39e-09 | 66 |
granulocyte monocyte progenitor cell | 4.83e-09 | 67 |
myeloid leukocyte | 2.46e-08 | 72 |
defensive cell | 3.43e-08 | 48 |
phagocyte | 3.43e-08 | 48 |
neurecto-epithelial cell | 4.23e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.71e-18 | 2 |
saliva-secreting gland | 9.91e-14 | 6 |
gland of oral region | 9.91e-14 | 6 |
gland of foregut | 9.91e-14 | 6 |
oral gland | 9.91e-14 | 6 |
oral cavity | 9.91e-14 | 6 |
lower lobe of right lung | 1.98e-10 | 1 |
right lung lobe | 1.98e-10 | 1 |
lower lobe of lung | 1.98e-10 | 1 |
lobe of lung | 1.98e-10 | 1 |
right lung | 1.98e-10 | 1 |
submandibular gland | 3.71e-10 | 1 |
submandibular gland primordium | 3.71e-10 | 1 |
parotid gland | 4.44e-10 | 1 |
cheek | 4.44e-10 | 1 |
parotid gland primordium | 4.44e-10 | 1 |
gland of gut | 1.91e-08 | 10 |
bone marrow | 7.78e-08 | 76 |
bone element | 3.55e-07 | 82 |