FFCP PHASE2:Hg19::chr3:69812745..69812760,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4286 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7105 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7105 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PFN0,B4DJL2,O75030 | ||
|association_with_transcript=38bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |association_with_transcript=38bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | ||
|cluster_id=chr3:69812745..69812760,+ | |cluster_id=chr3:69812745..69812760,+ |
Latest revision as of 12:12, 19 September 2015
Short description: | p10@MITF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 38bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@MITF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.89e-24 | 17 |
kidney epithelial cell | 1.89e-24 | 17 |
kidney tubule cell | 1.65e-15 | 10 |
nephron tubule epithelial cell | 1.65e-15 | 10 |
epithelial cell of nephron | 1.50e-10 | 15 |
brush border epithelial cell | 9.12e-07 | 3 |
kidney cortex tubule cell | 9.12e-07 | 3 |
epithelial cell of proximal tubule | 9.12e-07 | 3 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
kidney | 8.71e-23 | 26 |
kidney mesenchyme | 8.71e-23 | 26 |
upper urinary tract | 8.71e-23 | 26 |
kidney rudiment | 8.71e-23 | 26 |
kidney field | 8.71e-23 | 26 |
cavitated compound organ | 4.24e-19 | 31 |
uterus or analog | 3.75e-18 | 1 |
nephron tubule epithelium | 1.65e-15 | 10 |
urinary system structure | 1.50e-12 | 47 |
renal system | 2.76e-12 | 48 |
Showing 1 to 10 of 31 entries
Ontology term | p-value | n |
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clear cell adenocarcinoma | 2.02e-09 | 2 |
disease of anatomical entity | 4.08e-07 | 39 |
Showing 1 to 2 of 2 entries