FFCP PHASE1:Hg19::chr1:85156417..85156444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117178 | |EntrezGene=117178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16509 | |HGNC=16509 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D8 | |UniProt=Q9Y2D8 | ||
|association_with_transcript=0bp_to_ENST00000476905,uc001dkk.1_5end | |association_with_transcript=0bp_to_ENST00000476905,uc001dkk.1_5end | ||
|cluster_id=chr1:85156417..85156444,- | |||
|description=CAGE_peak_7_at_SSX2IP_5end | |description=CAGE_peak_7_at_SSX2IP_5end | ||
|id=chr1:85156417..85156444,- | |id=chr1:85156417..85156444,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;8.22e-20;3!CL:0000128;7.04e-15;7!CL:0000126;7.04e-15;7!CL:0000127;7.04e-15;7!CL:0002319;6.01e-14;25!CL:0000047;1.39e-13;2!CL:0000228;1.85e-07;1!CL:0002372;1.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.74e-20,3;CL:0000128,6.11e-15,7;CL:0000126,6.11e-15,7;CL:0000127,6.11e-15,7;CL:0002453,6.11e-15,7;CL:0002319,4.29e-14,25;CL:0000047,4.05e-13,8;CL:0000228,1.48e-07,1;CL:0002372,1.48e-07,1;CL:0000133,4.99e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;8.27e-08;1!DOID:4549;8.27e-08;1!DOID:5861;8.27e-08;1!DOID:6496;8.27e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.84e-08,1;DOID:4549,8.84e-08,1;DOID:5861,8.84e-08,1;DOID:6496,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-20!82;UBERON:0005743!1.76e-19!86;UBERON:0000073!2.44e-18!94;UBERON:0001016!2.44e-18!94;UBERON:0002780!6.03e-17!41;UBERON:0001890!6.03e-17!41;UBERON:0006240!6.03e-17!41;UBERON:0000955!7.99e-17!69;UBERON:0006238!7.99e-17!69;UBERON:0001049!2.65e-16!57;UBERON:0005068!2.65e-16!57;UBERON:0006241!2.65e-16!57;UBERON:0007135!2.65e-16!57;UBERON:0003080!3.26e-16!42;UBERON:0002616!5.52e-15!59;UBERON:0001893!2.82e-14!34;UBERON:0002020!5.54e-14!34;UBERON:0003528!5.54e-14!34;UBERON:0002791!9.35e-14!33;UBERON:0001869!1.44e-13!32;UBERON:0007023!1.99e-13!115;UBERON:0000956!8.92e-11!25;UBERON:0000203!8.92e-11!25;UBERON:0003075!2.48e-10!86;UBERON:0007284!2.48e-10!86;UBERON:0003056!4.38e-10!61;UBERON:0002346!1.19e-09!90;UBERON:0002619!1.71e-08!22;UBERON:0001950!2.45e-07!20;UBERON:0000153!5.26e-07!129;UBERON:0007811!5.26e-07!129;UBERON:0000033!6.38e-07!123;UBERON:0004121!9.90e-07!169 | |ontology_enrichment_uberon=UBERON:0001017!1.08e-20!82;UBERON:0005743!1.76e-19!86;UBERON:0000073!2.44e-18!94;UBERON:0001016!2.44e-18!94;UBERON:0002780!6.03e-17!41;UBERON:0001890!6.03e-17!41;UBERON:0006240!6.03e-17!41;UBERON:0000955!7.99e-17!69;UBERON:0006238!7.99e-17!69;UBERON:0001049!2.65e-16!57;UBERON:0005068!2.65e-16!57;UBERON:0006241!2.65e-16!57;UBERON:0007135!2.65e-16!57;UBERON:0003080!3.26e-16!42;UBERON:0002616!5.52e-15!59;UBERON:0001893!2.82e-14!34;UBERON:0002020!5.54e-14!34;UBERON:0003528!5.54e-14!34;UBERON:0002791!9.35e-14!33;UBERON:0001869!1.44e-13!32;UBERON:0007023!1.99e-13!115;UBERON:0000956!8.92e-11!25;UBERON:0000203!8.92e-11!25;UBERON:0003075!2.48e-10!86;UBERON:0007284!2.48e-10!86;UBERON:0003056!4.38e-10!61;UBERON:0002346!1.19e-09!90;UBERON:0002619!1.71e-08!22;UBERON:0001950!2.45e-07!20;UBERON:0000153!5.26e-07!129;UBERON:0007811!5.26e-07!129;UBERON:0000033!6.38e-07!123;UBERON:0004121!9.90e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-10,81;UBERON:0001016,4.39e-09,89 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14859585844162,1.50561867580173,2.00868223351684,0,0.164201178899891,0,0.393364276848904,0,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.852449501065388,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,1.0843174571537,0,0.144846518960824,0,0,0.189069634328136,0,0,0.916853528483988,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.675105328965065,1.07180705677318,0,0.0920498986422993,0,0,0.705264687593482,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,2.08674728955138,0,0,0,0,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0,0,0,0,0.492663237895943,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0,0,0.591092280605782,1.2937654491571,0.385029108839245,1.52456774533478,2.60279707715243,4.63973287666617,0.670065061337395,1.91381625495949,0,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.657017248110473,0,0.116210378459959,0,0,0,0,0,0.524497659837696,0,0.308061348417659,0,0,0.527758144464379,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0.438519753291869,1.5686127061494,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,1.08006287447623,0,0,0,0,0.185803175125719,0,0.569134746787313,0.318852545457645,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0.333698283423817,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0,0,2.95575571379191,0,0,0,2.96579179256249,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0.689486746482929,0.874813840149763,0.520874984799877,0,0.361789315876224,3.05163472634166,0.552896299656123,0.886642856860642,0.658156191461918,0.10893846351899,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.635746315921515,0,0.163232808159148,0,0.216388639742091,0,1.23840590304675,0.611030144933625,0.296521128680622,0.123563938946503,0,0.202203398942031,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,2.41981432097328,0.61214552326098,0.063186579628488,0.150323419414493,0.311064574191741,0.664653872707185,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0,0.290967049465258,2.11814704059601,3.16373037092745,0,0,1.13959432720582,0.391102765469606,0,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0.101998217636322,0,1.20084057741958,0.547621515567972,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0,0,0.0674035438541849,0.295282444544246,0,0.795229689809303,0.408610218334727,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0.425246896606173,0,1.33969702408637,0.157363764404994,0,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,0,0.732157589411779,0.500763722825999,0,0.776503360757966,0,0.553394539744923,0.124980407962107,0,0.285465333544967,0,0,0.7246051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|short_description=p7@SSX2IP | |short_description=p7@SSX2IP | ||
}} | }} |
Latest revision as of 12:29, 19 September 2015
Short description: | p7@SSX2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SSX2IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476905, uc001dkk.1_5end |
EntrezGene: | SSX2IP |
HGNC: | 16509 |
UniProt: | Q9Y2D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.74e-20 | 3 |
oligodendrocyte | 6.11e-15 | 7 |
macroglial cell | 6.11e-15 | 7 |
astrocyte | 6.11e-15 | 7 |
oligodendrocyte precursor cell | 6.11e-15 | 7 |
neural cell | 4.29e-14 | 25 |
neuronal stem cell | 4.05e-13 | 8 |
multinucleate cell | 1.48e-07 | 1 |
myotube | 1.48e-07 | 1 |
neurectodermal cell | 4.99e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.44e-10 | 81 |
nervous system | 4.39e-09 | 89 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.84e-08 | 1 |
extraosseous chondrosarcoma | 8.84e-08 | 1 |
myxoid chondrosarcoma | 8.84e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 8.84e-08 | 1 |