FFCP PHASE1:Hg19::chr11:65769758..65769782,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65769758..65769782,+
|short_description=p5@BANF1
|description=CAGE_peak_5_at_BANF1_5end
|association_with_transcript=-4bp_to_ENST00000524663_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8815 | |EntrezGene=8815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17397 | |HGNC=17397 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000524663_5end | |||
|cluster_id=chr11:65769758..65769782,+ | |||
|description=CAGE_peak_5_at_BANF1_5end | |||
|id=chr11:65769758..65769782,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.38e-33!679;CL:0000004!1.38e-33!679;CL:0000255!1.38e-33!679;CL:0000012!1.52e-32!682;CL:0000066!2.06e-29!254;CL:0000063!5.63e-24!578;CL:0000003!7.24e-20!722;CL:0000144!7.67e-16!625;CL:0002371!1.29e-13!591;CL:0000076!1.63e-12!62;CL:0002321!9.74e-12!248;CL:0000220!1.24e-11!246;CL:0000213!3.14e-09!57;CL:0000215!3.14e-09!57;CL:0000115!8.01e-08!35;CL:1000449!1.27e-07!16;CL:0000222!1.31e-07!119;CL:1000497!2.69e-07!18;CL:0002518!2.69e-07!18;CL:0002078!4.25e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.54e-09;15!CL:1000497;1.17e-08;17!CL:0002518;1.17e-08;17!CL:0002681;1.70e-07;12!CL:0002584;1.70e-07;12!CL:1000507;5.44e-07;10!CL:1000494;5.44e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.94e-30,253;CL:0000076,1.88e-12,63;CL:0002321,1.82e-11,250;CL:0000213,3.08e-09,58;CL:0000215,3.08e-09,58;CL:1000449,4.20e-09,15;CL:1000497,1.28e-08,17;CL:0002518,1.28e-08,17;CL:0000115,7.37e-08,36;CL:0002681,1.50e-07,12;CL:0002584,1.50e-07,12;CL:0000222,2.97e-07,121;CL:0002078,4.17e-07,45;CL:1000507,5.96e-07,10;CL:1000494,5.96e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.68e-20!235;DOID:14566!4.04e-20!239;DOID:305!2.38e-14!106;DOID:0050687!4.31e-10!143;DOID:0050686!1.21e-09!137;DOID:2531!4.94e-08!51;DOID:0060083!4.94e-08!51;DOID:7!4.11e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.58e-20,235;DOID:14566,3.91e-20,239;DOID:305,2.34e-14,106;DOID:0050687,4.22e-10,143;DOID:0050686,1.18e-09,137;DOID:2531,4.90e-08,51;DOID:0060083,4.90e-08,51;DOID:7,4.52e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004211!1.27e-07!16;UBERON:0001285!1.27e-07!16;UBERON:0007684!1.27e-07!16;UBERON:0003220!1.27e-07!16;UBERON:0004208!1.27e-07!16;UBERON:0000058!6.66e-07!26;UBERON:0006555!8.64e-07!17;UBERON:0005103!8.64e-07!17;UBERON:0000083!8.64e-07!17;UBERON:0009201!8.64e-07!17;UBERON:0004819!8.64e-07!17;UBERON:0006553!8.64e-07!17;UBERON:0003074!8.64e-07!17;UBERON:0003060!8.64e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.54e-09;15!UBERON:0004819;4.54e-09;15!UBERON:0001285;4.54e-09;15!UBERON:0007684;4.54e-09;15!UBERON:0001225;1.70e-07;12!UBERON:0008987;1.70e-07;12!UBERON:0001851;4.03e-07;15!UBERON:0000353;4.70e-07;15!UBERON:0004211;5.44e-07;10!UBERON:0009773;5.44e-07;10!UBERON:0001231;5.44e-07;10!UBERON:0004810;5.44e-07;10!UBERON:0006554;5.73e-07;30!UBERON:0001008;5.73e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.20e-09,15;UBERON:0009773,4.20e-09,15;UBERON:0001231,4.20e-09,15;UBERON:0001285,4.20e-09,15;UBERON:0007684,4.20e-09,15;UBERON:0004208,4.20e-09,15;UBERON:0006555,4.31e-08,16;UBERON:0004819,4.31e-08,16;UBERON:0001225,1.50e-07,12;UBERON:0008987,1.50e-07,12;UBERON:0000353,2.44e-07,15;UBERON:0006554,2.61e-07,47;UBERON:0001851,4.45e-07,15;UBERON:0004810,5.96e-07,10;UBERON:0001008,7.03e-07,48 | |||
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| ||
|short_description=p5@BANF1 | |||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p5@BANF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BANF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000524663_5end |
EntrezGene: | BANF1 |
HGNC: | 17397 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.94e-30 | 253 |
squamous epithelial cell | 1.88e-12 | 63 |
embryonic cell | 1.82e-11 | 250 |
lining cell | 3.08e-09 | 58 |
barrier cell | 3.08e-09 | 58 |
epithelial cell of nephron | 4.20e-09 | 15 |
kidney cell | 1.28e-08 | 17 |
kidney epithelial cell | 1.28e-08 | 17 |
endothelial cell | 7.37e-08 | 36 |
kidney cortical cell | 1.50e-07 | 12 |
renal cortical epithelial cell | 1.50e-07 | 12 |
mesodermal cell | 2.97e-07 | 121 |
meso-epithelial cell | 4.17e-07 | 45 |
kidney tubule cell | 5.96e-07 | 10 |
nephron tubule epithelial cell | 5.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.20e-09 | 15 |
renal tubule | 4.20e-09 | 15 |
nephron tubule | 4.20e-09 | 15 |
nephron | 4.20e-09 | 15 |
uriniferous tubule | 4.20e-09 | 15 |
nephrogenic mesenchyme | 4.20e-09 | 15 |
excretory tube | 4.31e-08 | 16 |
kidney epithelium | 4.31e-08 | 16 |
cortex of kidney | 1.50e-07 | 12 |
renal parenchyma | 1.50e-07 | 12 |
parenchyma | 2.44e-07 | 15 |
urinary system structure | 2.61e-07 | 47 |
cortex | 4.45e-07 | 15 |
nephron tubule epithelium | 5.96e-07 | 10 |
renal system | 7.03e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.58e-20 | 235 |
disease of cellular proliferation | 3.91e-20 | 239 |
carcinoma | 2.34e-14 | 106 |
cell type cancer | 4.22e-10 | 143 |
organ system cancer | 1.18e-09 | 137 |
hematologic cancer | 4.90e-08 | 51 |
immune system cancer | 4.90e-08 | 51 |
disease of anatomical entity | 4.52e-07 | 39 |