FFCP PHASE1:Hg19::chr22:26961328..26961339,-: Difference between revisions
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|id=chr22:26961328..26961339,-
|short_description=p3@TPST2
|description=CAGE_peak_3_at_TPST2_5end
|association_with_transcript=0bp_to_ENST00000398110_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8459 | |EntrezGene=8459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12021 | |HGNC=12021 | ||
|TSSclassifier=strong | |||
|UniProt=O60704 | |UniProt=O60704 | ||
|association_with_transcript=0bp_to_ENST00000398110_5end | |||
|cluster_id=chr22:26961328..26961339,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_3_at_TPST2_5end | |||
|id=chr22:26961328..26961339,- | |||
|ontology_enrichment_celltype=CL:0000244!2.69e-08!4;CL:0000731!2.69e-08!4;CL:0000575!1.09e-07!2;CL:0002327!1.39e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.89e-28;4!CL:0000731;2.89e-28;4!CL:0000575;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.49e-28,4;CL:0000731,3.49e-28,4;CL:0000575,1.99e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.67e-26;2!UBERON:0005754;3.50e-14;1!UBERON:0003124;1.42e-13;1!UBERON:0007123;5.29e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-19!115;UBERON:0001950!1.57e-14!20;UBERON:0002619!4.54e-13!22;UBERON:0000153!5.86e-13!129;UBERON:0007811!5.86e-13!129;UBERON:0001893!5.88e-13!34;UBERON:0000200!2.83e-12!6;UBERON:0001869!6.08e-12!32;UBERON:0003080!9.66e-12!42;UBERON:0002791!1.86e-11!33;UBERON:0006947!2.55e-11!3;UBERON:0004054!2.55e-11!3;UBERON:0000956!2.66e-11!25;UBERON:0000203!2.66e-11!25;UBERON:0000974!7.27e-11!10;UBERON:0002780!2.77e-10!41;UBERON:0001890!2.77e-10!41;UBERON:0006240!2.77e-10!41;UBERON:0002771!8.30e-10!3;UBERON:0003056!1.09e-09!61;UBERON:0000033!1.35e-09!123;UBERON:0002020!2.34e-09!34;UBERON:0003528!2.34e-09!34;UBERON:0005904!1.43e-08!4;UBERON:0004121!3.82e-08!169;UBERON:0001049!7.42e-08!57;UBERON:0005068!7.42e-08!57;UBERON:0006241!7.42e-08!57;UBERON:0007135!7.42e-08!57;UBERON:0000341!7.88e-08!2;UBERON:0000924!8.30e-08!173;UBERON:0006601!8.30e-08!173;UBERON:0001911!1.39e-07!4;UBERON:0005333!1.39e-07!4;UBERON:0008425!1.39e-07!4;UBERON:0005311!1.39e-07!4;UBERON:0002616!1.73e-07!59;UBERON:0001017!6.06e-07!82;UBERON:0000955!8.89e-07!69;UBERON:0006238!8.89e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.75e-39;3!UBERON:0004054;9.75e-39;3!UBERON:0005904;2.99e-29;4!UBERON:0000341;2.37e-25;2!UBERON:0000365;9.22e-23;5!UBERON:0005910;4.37e-19;6!UBERON:0000998;3.50e-14;1!UBERON:0006868;3.50e-14;1!UBERON:0001301;3.98e-14;1!UBERON:0001000;4.53e-14;1!UBERON:0005352;4.53e-14;1!UBERON:0000058;4.31e-12;10!UBERON:0003135;4.81e-11;11!UBERON:0002046;5.29e-11;5!UBERON:0000486;7.54e-10;12!UBERON:0003101;1.74e-09;22!UBERON:0000079;1.74e-09;22!UBERON:0000974;4.20e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.75e-39,3;UBERON:0004054,9.75e-39,3;UBERON:0005904,2.99e-29,4;UBERON:0000341,2.10e-25,2;UBERON:0000365,1.07e-22,5;UBERON:0005910,4.95e-19,6;UBERON:0000998,3.50e-14,1;UBERON:0006868,3.50e-14,1;UBERON:0001301,3.98e-14,1;UBERON:0001000,4.53e-14,1;UBERON:0005352,4.53e-14,1;UBERON:0006554,2.05e-12,47;UBERON:0001008,3.82e-12,48;UBERON:0003135,4.81e-11,11;UBERON:0002046,5.57e-11,5;UBERON:0004117,5.57e-11,5;UBERON:0007689,5.57e-11,5;UBERON:0007123,5.57e-11,5;UBERON:0003091,5.57e-11,5;UBERON:0003101,1.72e-09,22;UBERON:0000079,1.72e-09,22;UBERON:0004175,2.38e-08,25 | |||
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| ||
|short_description=p3@TPST2 | |||
}} | }} |
Latest revision as of 13:07, 19 September 2015
Short description: | p3@TPST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPST2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000398110_5end |
EntrezGene: | TPST2 |
HGNC: | 12021 |
UniProt: | O60704 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.49e-28 | 4 |
urothelial cell | 3.49e-28 | 4 |
corneal epithelial cell | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.75e-39 | 3 |
internal male genitalia | 9.75e-39 | 3 |
duct of male reproductive system | 2.99e-29 | 4 |
throat | 2.10e-25 | 2 |
urothelium | 1.07e-22 | 5 |
transitional epithelium | 4.95e-19 | 6 |
seminal vesicle | 3.50e-14 | 1 |
seminal fluid secreting gland | 3.50e-14 | 1 |
epididymis | 3.98e-14 | 1 |
vas deferens | 4.53e-14 | 1 |
spermatic cord | 4.53e-14 | 1 |
urinary system structure | 2.05e-12 | 47 |
renal system | 3.82e-12 | 48 |
male reproductive organ | 4.81e-11 | 11 |
thyroid gland | 5.57e-11 | 5 |
pharyngeal pouch | 5.57e-11 | 5 |
thyroid diverticulum | 5.57e-11 | 5 |
pharyngeal pouch 2 | 5.57e-11 | 5 |
thyroid primordium | 5.57e-11 | 5 |
male organism | 1.72e-09 | 22 |
male reproductive system | 1.72e-09 | 22 |
internal genitalia | 2.38e-08 | 25 |