FFCP PHASE1:Hg19::chr19:51504395..51504409,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:51504395..51504409,-
|short_description=p3@KLK8
|description=CAGE_peak_3_at_KLK8_5end
|association_with_transcript=14bp_to_CU691932,HQ448625_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11202 | |EntrezGene=11202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6369 | |HGNC=6369 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_CU691932,HQ448625_5end | |||
|cluster_id=chr19:51504395..51504409,- | |||
|description=CAGE_peak_3_at_KLK8_5end | |||
|id=chr19:51504395..51504409,- | |||
|ontology_enrichment_celltype=CL:0000066!3.71e-17!254;CL:0000039!4.17e-16!7;CL:0000586!4.17e-16!7;CL:0002159!1.77e-14!13;CL:0002251!3.96e-14!21;CL:0002322!2.03e-12!5;CL:0002076!5.06e-12!43;CL:0002077!4.79e-10!33;CL:0000223!5.47e-10!59;CL:0002166!3.35e-08!3;CL:0000076!1.08e-07!62;CL:0002621!1.73e-07!3;CL:0000240!6.75e-07!6;CL:0000311!6.75e-07!6;CL:0000079!6.75e-07!6;CL:0000237!6.75e-07!6;CL:0000036!6.75e-07!6;CL:0000357!6.75e-07!6;CL:0000114!6.75e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.25e-18;14!CL:0000575;1.91e-12;2!CL:0002077;3.19e-12;34!CL:0000312;4.12e-10;5!CL:0002322;5.47e-10;5!CL:0000240;1.66e-08;6!CL:0000311;1.66e-08;6!CL:0000079;1.66e-08;6!CL:0000237;1.66e-08;6!CL:0002166;6.50e-08;3!CL:0002251;9.74e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.32e-18,14;CL:0000066,1.29e-14,253;CL:0002077,5.99e-14,34;CL:0000575,2.40e-12,2;CL:0000076,3.33e-12,63;CL:0000312,4.39e-10,5;CL:0002322,5.31e-10,5;CL:0000240,1.75e-08,6;CL:0000311,1.75e-08,6;CL:0000079,1.75e-08,6;CL:0000237,1.75e-08,6;CL:0000036,1.75e-08,6;CL:0000357,1.75e-08,6;CL:0000114,1.75e-08,6;CL:0002166,6.74e-08,3;CL:0002251,8.86e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.07e-12;2!UBERON:0010056;7.07e-12;2!CL:0000357;1.66e-08;6!CL:0000114;1.66e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!4.71e-14!14;DOID:305!6.41e-10!106;DOID:0050687!1.03e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-24;14!DOID:299;2.44e-07;25!DOID:3151;3.51e-07;1!DOID:3149;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.11e-24,14;DOID:305,5.98e-10,106;DOID:0050687,1.57e-07,143;DOID:299,2.37e-07,25;DOID:3151,3.52e-07,1;DOID:3149,3.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.58e-13!5;UBERON:0003343!2.16e-11!4;UBERON:0004785!2.16e-11!4;UBERON:0000166!9.22e-10!21;UBERON:0000344!1.50e-09!12;UBERON:0000165!3.04e-08!28;UBERON:0000930!3.04e-08!28;UBERON:0001723!3.60e-08!3;UBERON:0001033!3.60e-08!3;UBERON:0010056!3.60e-08!3;UBERON:0001949!1.73e-07!3;UBERON:0000161!1.81e-07!35;UBERON:0004176!4.36e-07!22;UBERON:0000473!6.51e-07!8;UBERON:0003135!8.41e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.66e-23;4!UBERON:0004785;7.66e-23;4!UBERON:0000974;2.76e-15;6!UBERON:0001723;3.35e-08;3!UBERON:0001033;3.35e-08;3!UBERON:0000997;2.95e-07;1!UBERON:0005056;2.95e-07;1!UBERON:0004176;2.95e-07;1!UBERON:0003729;4.26e-07;13!UBERON:0004913;5.41e-07;1!UBERON:0003703;5.41e-07;1!UBERON:0001174;5.41e-07;1!UBERON:0004914;5.41e-07;1!UBERON:0000344;9.74e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.47e-23,4;UBERON:0004785,7.47e-23,4;UBERON:0000974,3.24e-09,10;UBERON:0001723,3.54e-08,3;UBERON:0001033,3.54e-08,3;UBERON:0010056,3.54e-08,3;UBERON:0003102,7.05e-08,99;UBERON:0000997,2.95e-07,1;UBERON:0005056,2.95e-07,1;UBERON:0003729,4.23e-07,13;UBERON:0004913,5.57e-07,1;UBERON:0003703,5.57e-07,1;UBERON:0001174,5.57e-07,1;UBERON:0004914,5.57e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46442932438813,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,1.58565817968474,0.795178609928912,1.2781333715647,0.621966330092223,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,2.31216636546751,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.00789276919316,0.850650583454319,0.447792613514241,1.74380363108377,8.43441894163465,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,2.76242966807689,0,0,0,1.35359883872224,0.693138033939733,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30942754475111,0,0,0,0,0,0,0,0,0,0,5.85579725970134,0.153900517007594,0,2.53620294826866,0.807818799687949,0.977826347298073,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,3.91329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,17.4426467397592,0,0.17472666824203,0,0,0,0,1.35784623083787,0,0,0,0,0,0.977756913674015,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,6.37325906438606,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63852017853338,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,4.61602375474167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1092150056056,3.53909170043221,3.66857197043358,4.50550097986319,0,0,0,0.150420656698515,0,0,0.785720083444267,0,4.28782650029431,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9567785821453,0,0,1.4541206133713,1.96300467230486,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28529452653578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0.801652215796681,0.551369397209069,0.50141507858475,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0,0,0.202117188958219,1.30630048738177,0.342233301085281,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@KLK8 | |||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p3@KLK8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLK8_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_CU691932, HQ448625_5end |
EntrezGene: | KLK8 |
HGNC: | 6369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.32e-18 | 14 |
epithelial cell | 1.29e-14 | 253 |
ecto-epithelial cell | 5.99e-14 | 34 |
corneal epithelial cell | 2.40e-12 | 2 |
squamous epithelial cell | 3.33e-12 | 63 |
keratinocyte | 4.39e-10 | 5 |
embryonic stem cell | 5.31e-10 | 5 |
stratified squamous epithelial cell | 1.75e-08 | 6 |
keratin accumulating cell | 1.75e-08 | 6 |
stratified epithelial cell | 1.75e-08 | 6 |
keratinizing barrier epithelial cell | 1.75e-08 | 6 |
epithelial fate stem cell | 1.75e-08 | 6 |
stratified epithelial stem cell | 1.75e-08 | 6 |
surface ectodermal cell | 1.75e-08 | 6 |
epithelial cell of Malassez | 6.74e-08 | 3 |
epithelial cell of alimentary canal | 8.86e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.47e-23 | 4 |
respiratory system mucosa | 7.47e-23 | 4 |
neck | 3.24e-09 | 10 |
tongue | 3.54e-08 | 3 |
gustatory system | 3.54e-08 | 3 |
future tongue | 3.54e-08 | 3 |
surface structure | 7.05e-08 | 99 |
mammalian vulva | 2.95e-07 | 1 |
external female genitalia | 2.95e-07 | 1 |
mouth mucosa | 4.23e-07 | 13 |
hepatopancreatic ampulla | 5.57e-07 | 1 |
extrahepatic bile duct | 5.57e-07 | 1 |
common bile duct | 5.57e-07 | 1 |
duodenal papilla | 5.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.11e-24 | 14 |
carcinoma | 5.98e-10 | 106 |
cell type cancer | 1.57e-07 | 143 |
adenocarcinoma | 2.37e-07 | 25 |
skin squamous cell carcinoma | 3.52e-07 | 1 |
keratoacanthoma | 3.52e-07 | 1 |