FFCP PHASE1:Hg19::chr6:10556451..10556476,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10556451..10556476,+ to FFCP PHASE1:Hg19::chr6:10556451..10556476,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q06430 | |UniProt=Q06430 | ||
|association_with_transcript=211bp_to_ENST00000316170_5end | |||
|cluster_id=chr6:10556451..10556476,+ | |||
|description=CAGE_peak_8_at_GCNT2_5end | |||
|id=chr6:10556451..10556476,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.26e-11!8;CL:0002139!6.07e-10!24;CL:0002319!1.27e-09!25;CL:0000540!1.70e-09!6;CL:0000031!1.70e-09!6;CL:0000404!1.70e-09!6;CL:0002322!4.44e-09!5;CL:0000133!7.67e-09!59;CL:0000071!5.07e-07!18;CL:0002546!5.07e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.08e-19;5!CL:0002144;5.81e-12;3!CL:0000540;1.73e-10;6!CL:0000404;1.73e-10;6!CL:0002138;8.16e-10;6!CL:0000039;8.40e-09;7!CL:0000586;8.40e-09;7!CL:0002321;1.01e-08;15!CL:0002139;2.17e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.10e-19,5;CL:0002144,6.39e-12,3;CL:0000047,1.08e-11,8;CL:0000540,1.91e-10,6;CL:0000031,1.91e-10,6;CL:0000404,1.91e-10,6;CL:0005020,7.54e-10,6;CL:0002138,7.54e-10,6;CL:0005022,7.54e-10,6;CL:0000039,1.05e-08,7;CL:0000586,1.05e-08,7;CL:0002139,2.12e-08,24;CL:0000133,2.08e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.73e-10;6!CL:0005022;8.16e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-33!82;UBERON:0005743!9.43e-33!86;UBERON:0000073!2.83e-32!94;UBERON:0001016!2.83e-32!94;UBERON:0001049!5.27e-26!57;UBERON:0005068!5.27e-26!57;UBERON:0006241!5.27e-26!57;UBERON:0007135!5.27e-26!57;UBERON:0007023!4.64e-25!115;UBERON:0003075!1.64e-24!86;UBERON:0007284!1.64e-24!86;UBERON:0002346!5.20e-24!90;UBERON:0000955!1.24e-22!69;UBERON:0006238!1.24e-22!69;UBERON:0002616!7.56e-22!59;UBERON:0004121!5.71e-20!169;UBERON:0000924!6.36e-20!173;UBERON:0006601!6.36e-20!173;UBERON:0002020!1.07e-19!34;UBERON:0003528!1.07e-19!34;UBERON:0001893!1.61e-19!34;UBERON:0002780!2.50e-19!41;UBERON:0001890!2.50e-19!41;UBERON:0006240!2.50e-19!41;UBERON:0002791!1.09e-18!33;UBERON:0003080!1.15e-18!42;UBERON:0003056!2.09e-18!61;UBERON:0001869!6.49e-18!32;UBERON:0000153!1.19e-16!129;UBERON:0007811!1.19e-16!129;UBERON:0000033!1.04e-15!123;UBERON:0002619!3.15e-14!22;UBERON:0001950!4.48e-14!20;UBERON:0000956!1.40e-13!25;UBERON:0000203!1.40e-13!25;UBERON:0000468!2.60e-10!659;UBERON:0004111!7.00e-10!241;UBERON:0000477!8.84e-10!286;UBERON:0000922!2.37e-09!612;UBERON:0000025!5.84e-09!194;UBERON:0000467!1.19e-08!625;UBERON:0000480!1.40e-08!626;UBERON:0003076!1.56e-08!15;UBERON:0003057!1.56e-08!15;UBERON:0000064!8.61e-08!219;UBERON:0001871!9.29e-08!7;UBERON:0002308!9.85e-08!9;UBERON:0000125!9.85e-08!9;UBERON:0004733!1.35e-07!12;UBERON:0002028!1.35e-07!12;UBERON:0007277!1.35e-07!12;UBERON:0001986!5.07e-07!18;UBERON:0004638!5.07e-07!18;UBERON:0004852!5.07e-07!18;UBERON:0000483!6.25e-07!309;UBERON:0004732!7.34e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.86e-23;49!UBERON:0010523;5.81e-12;3!UBERON:0001915;5.81e-12;3!UBERON:0001982;5.81e-12;3!UBERON:0000160;1.79e-08;17!UBERON:0000473;1.06e-07;8!UBERON:0001473;2.29e-07;8!UBERON:0004536;2.29e-07;8!UBERON:0006558;2.29e-07;8!UBERON:0002108;8.24e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.39e-12,3;UBERON:0001915,6.39e-12,3;UBERON:0001982,6.39e-12,3;UBERON:0000160,2.00e-08,17;UBERON:0000473,1.29e-07,8;UBERON:0001473,2.16e-07,8;UBERON:0004536,2.16e-07,8;UBERON:0006558,2.16e-07,8;UBERON:0002108,9.42e-07,4 | |||
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| ||
|short_description=p8@GCNT2 | |||
}} | }} |
Latest revision as of 14:04, 19 September 2015
Short description: | p8@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENST00000316170_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q06430 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.10e-19 | 5 |
capillary endothelial cell | 6.39e-12 | 3 |
neuronal stem cell | 1.08e-11 | 8 |
neuron | 1.91e-10 | 6 |
neuroblast | 1.91e-10 | 6 |
electrically signaling cell | 1.91e-10 | 6 |
lymphangioblast | 7.54e-10 | 6 |
endothelial cell of lymphatic vessel | 7.54e-10 | 6 |
vascular lymphangioblast | 7.54e-10 | 6 |
germ line cell | 1.05e-08 | 7 |
germ cell | 1.05e-08 | 7 |
endothelial cell of vascular tree | 2.12e-08 | 24 |
neurectodermal cell | 2.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.39e-12 | 3 |
endothelium of capillary | 6.39e-12 | 3 |
capillary | 6.39e-12 | 3 |
intestine | 2.00e-08 | 17 |
testis | 1.29e-07 | 8 |
lymphatic vessel | 2.16e-07 | 8 |
lymph vasculature | 2.16e-07 | 8 |
lymphatic part of lymphoid system | 2.16e-07 | 8 |
small intestine | 9.42e-07 | 4 |