FFCP PHASE1:Hg19::chr1:198509806..198509829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=127124 | |EntrezGene=127124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18265 | |HGNC=18265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009wzd.2_5end | |association_with_transcript=0bp_to_uc009wzd.2_5end | ||
|cluster_id=chr1:198509806..198509829,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_ATP6V1G3_5end | |description=CAGE_peak_1_at_ATP6V1G3_5end | ||
|id=chr1:198509806..198509829,- | |id=chr1:198509806..198509829,- | ||
|ontology_enrichment_celltype=CL:0002563!1.64e-11!4 | |ontology_enrichment_celltype=CL:0002563!1.64e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.46e-13;2!CL:0002563;1.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-13,2;CL:0002563,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.22e-26;1!UBERON:0003918;5.96e-23;10!UBERON:0007687;5.96e-23;10!UBERON:0007297;1.00e-13;2!UBERON:0003104;1.25e-13;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.41e-32!3;UBERON:0004054!1.41e-32!3;UBERON:0005904!1.29e-24!4;UBERON:0003101!8.07e-17!22;UBERON:0000079!8.07e-17!22;UBERON:0003135!1.15e-15!11;UBERON:0001000!2.93e-12!1;UBERON:0005352!2.93e-12!1;UBERON:0000998!3.65e-12!1;UBERON:0006868!3.65e-12!1;UBERON:0001736!6.26e-12!1;UBERON:0006298!6.26e-12!1;UBERON:0001301!9.61e-12!1;UBERON:0001242!1.64e-11!4;UBERON:0001262!1.64e-11!4;UBERON:0004786!1.64e-11!4;UBERON:0004808!1.64e-11!4;UBERON:0001277!1.64e-11!4;UBERON:0006554!4.63e-11!44;UBERON:0001008!8.44e-11!45;UBERON:0003350!2.17e-09!5;UBERON:0001046!5.39e-09!19;UBERON:0003937!1.86e-08!12;UBERON:0005399!1.86e-08!12;UBERON:0000489!3.45e-08!32;UBERON:0000162!3.33e-07!14;UBERON:0001353!3.33e-07!14;UBERON:0000163!3.33e-07!14;UBERON:0006866!3.33e-07!14;UBERON:0000164!3.33e-07!14;UBERON:0000931!3.33e-07!14;UBERON:0003064!5.96e-07!37;UBERON:0004122!9.36e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.06e-34;3!UBERON:0004054;5.06e-34;3!UBERON:0001000;2.78e-26;1!UBERON:0005352;2.78e-26;1!UBERON:0000998;5.22e-26;1!UBERON:0006868;5.22e-26;1!UBERON:0005904;8.13e-26;4!UBERON:0000058;5.83e-11;10!UBERON:0003135;4.73e-10;11!UBERON:0001052;1.98e-07;4!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.66e-34,3;UBERON:0004054,4.66e-34,3;UBERON:0001000,2.78e-26,1;UBERON:0005352,2.78e-26,1;UBERON:0000998,4.61e-26,1;UBERON:0006868,4.61e-26,1;UBERON:0005904,7.64e-26,4;UBERON:0003135,4.62e-10,11;UBERON:0002113,2.75e-09,26;UBERON:0003918,2.75e-09,26;UBERON:0011143,2.75e-09,26;UBERON:0005095,2.75e-09,26;UBERON:0007687,2.75e-09,26;UBERON:0000489,6.85e-08,31;UBERON:0001052,2.04e-07,4;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4 | |||
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|short_description=p1@ATP6V1G3 | |short_description=p1@ATP6V1G3 | ||
}} | }} |
Latest revision as of 14:21, 19 September 2015
Short description: | p1@ATP6V1G3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP6V1G3_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_uc009wzd.2_5end |
EntrezGene: | ATP6V1G3 |
HGNC: | 18265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.55e-13 | 2 |
intestinal epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.66e-34 | 3 |
internal male genitalia | 4.66e-34 | 3 |
vas deferens | 2.78e-26 | 1 |
spermatic cord | 2.78e-26 | 1 |
seminal vesicle | 4.61e-26 | 1 |
seminal fluid secreting gland | 4.61e-26 | 1 |
duct of male reproductive system | 7.64e-26 | 4 |
male reproductive organ | 4.62e-10 | 11 |
kidney | 2.75e-09 | 26 |
kidney mesenchyme | 2.75e-09 | 26 |
upper urinary tract | 2.75e-09 | 26 |
kidney rudiment | 2.75e-09 | 26 |
kidney field | 2.75e-09 | 26 |
cavitated compound organ | 6.85e-08 | 31 |
rectum | 2.04e-07 | 4 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |